RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 CLCN1P35523 988 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 PPP3CCP48454 512 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 SLC5A3P53794 718 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 UBASH3AP57075 661 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 BPIFB4P59827 614 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 PTK2Q05397 1052 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 BST2Q10589 180 aaKnown RBP16.44■□□□□ 0.22
CPNE1-228ENST00000498814 MEA1Q16626 185 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 ARHGAP15Q53QZ3 475 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 RNF214Q8ND24 703 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 SCAMP5Q8TAC9 235 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 ZNF606Q8WXB4 792 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 MCRS1Q96EZ8 462 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 LIMD1Q9UGP4 676 aa16.44■□□□□ 0.22
CPNE1-228ENST00000498814 ANHXE9PGG2 379 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 XPO1O14980 1071 aaKnown RBP16.43■□□□□ 0.22
CPNE1-228ENST00000498814 THAP12O43422 761 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 TADA3O75528 432 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 PNMA6AP0CW24 399 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-228ENST00000498814 SETSIPP0DME0 302 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 DDX6P26196 483 aaKnown RBP eCLIP16.43■□□□□ 0.224e-9■■□□□ 11.8
CPNE1-228ENST00000498814 JAM2P57087 298 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 PDE4CQ08493 712 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 TAF10Q12962 218 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 GPR158Q5T848 1215 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 PIGZQ86VD9 579 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 PDZD8Q8NEN9 1154 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 UBA3Q8TBC4 463 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 OVCA2Q8WZ82 227 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 MRPS31Q92665 395 aaKnown RBP16.43■□□□□ 0.22
CPNE1-228ENST00000498814 NXPE3Q969Y0 559 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 SLITRK1Q96PX8 696 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 FBXO44Q9H4M3 255 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 TASP1Q9H6P5 420 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 ACP6Q9NPH0 428 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 NLRC4Q9NPP4 1024 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 NCANO14594 1321 aa16.43■□□□□ 0.22
CPNE1-228ENST00000498814 WEE1P30291 646 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 PLA2G4AP47712 749 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 KIF11P52732 1056 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 CYP4F8P98187 520 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 IFRD2Q12894 506 aaPredicted RBP16.42■□□□□ 0.22
CPNE1-228ENST00000498814 RAB41Q5JT25 222 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 STXBP5Q5T5C0 1151 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 MTSS1LQ765P7 747 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 GPRIN1Q7Z2K8 1008 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 MON1AQ86VX9 555 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 RNF135Q8IUD6 432 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 SLC35F5Q8WV83 523 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 FBXO32Q969P5 355 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 ZSWIM3Q96MP5 696 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 SPAG5Q96R06 1193 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 ANP32EQ9BTT0 268 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 SLITRK6Q9H5Y7 841 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 TRPV4Q9HBA0 871 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 TRPM5Q9NZQ8 1165 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 IFNKQ9P0W0 207 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 IGSF9Q9P2J2 1179 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 USP3Q9Y6I4 520 aa16.42■□□□□ 0.22
CPNE1-228ENST00000498814 ZNF840PA6NDX5 716 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 M0QYV0 167 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 TULP2O00295 520 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 PFKLP17858 780 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 SOX5P35711 763 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 PBX1P40424 430 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 STAT1P42224 750 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 HTR4Q13639 388 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 PTPN21Q16825 1174 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 FAM78AQ5JUQ0 283 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 SNX30Q5VWJ9 437 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 SLC47A2Q86VL8 602 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 ZSCAN18Q8TBC5 510 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-228ENST00000498814 KCTD13Q8WZ19 329 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 SMARCD2Q92925 531 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 SECISBP2LQ93073 1101 aaKnown RBP16.41■□□□□ 0.22
CPNE1-228ENST00000498814 ASB16Q96NS5 453 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 COL25A1Q9BXS0 654 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-228ENST00000498814 SLC46A2Q9BY10 475 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 KCNK12Q9HB15 430 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 PCDHGC3Q9UN70 934 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 SCML2Q9UQR0 700 aa16.41■□□□□ 0.22
CPNE1-228ENST00000498814 HELZP42694 1942 aaKnown RBP16.41■□□□□ 0.22
CPNE1-228ENST00000498814 ZDHHC11BP0C7U3 371 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 CYP11B1P15538 503 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 GPD2P43304 727 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 FIGNQ5HY92 759 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 TXNDC8Q6A555 127 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 DENND1BQ6P3S1 775 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 PARM1Q6UWI2 310 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 CCDC186Q7Z3E2 898 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 CACNA2D4Q7Z3S7 1137 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 CMTM8Q8IZV2 173 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 MAB21L3Q8N8X9 362 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 FGF14Q92915 247 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 HSFY1Q96LI6 401 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 EDEM3Q9BZQ6 932 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 CHORDC1Q9UHD1 332 aaPredicted RBP16.4■□□□□ 0.22
CPNE1-228ENST00000498814 MYO6Q9UM54 1294 aa16.4■□□□□ 0.22
CPNE1-228ENST00000498814 CBFA2T2O43439 604 aa16.39■□□□□ 0.21
CPNE1-228ENST00000498814 ECI2O75521 394 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms