RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 UNC13DQ70J99 1090 aa12.12□□□□□ -0.47
PBX1-211ENST00000498497 ELMOD2Q8IZ81 293 aa12.12□□□□□ -0.47
PBX1-211ENST00000498497 SPERTQ8NA61 448 aa12.12□□□□□ -0.47
PBX1-211ENST00000498497 SNF8Q96H20 258 aa12.12□□□□□ -0.47
PBX1-211ENST00000498497 VCPIP1Q96JH7 1222 aa12.12□□□□□ -0.47
PBX1-211ENST00000498497 STRBPQ96SI9 672 aaKnown RBP12.12□□□□□ -0.47
PBX1-211ENST00000498497 PYM1Q9BRP8 204 aaKnown RBP12.12□□□□□ -0.47
PBX1-211ENST00000498497 TMEM79Q9BSE2 394 aa12.12□□□□□ -0.47
PBX1-211ENST00000498497 GANQ9H2C0 597 aa12.12□□□□□ -0.47
PBX1-211ENST00000498497 PLA2G4CQ9UP65 541 aa12.12□□□□□ -0.47
PBX1-211ENST00000498497 CES1P23141 567 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 SOX11P35716 441 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 GAD2Q05329 585 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 HNRNPDQ14103 355 aaKnown RBP12.11□□□□□ -0.47
PBX1-211ENST00000498497 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 ZC3H7AQ8IWR0 971 aaKnown RBP12.11□□□□□ -0.47
PBX1-211ENST00000498497 GLIS1Q8NBF1 620 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 LILRB4Q8NHJ6 448 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 ELMO1Q92556 727 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 MYO5BQ9ULV0 1848 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 KDM4FA0A1W2PPD8 638 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 F8W8V4 182 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 CES2O00748 559 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 AIM2O14862 343 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 TP73O15350 636 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 LPXNO60711 386 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 SEMA3DO95025 777 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 TOP3BO95985 862 aaKnown RBP12.11□□□□□ -0.47
PBX1-211ENST00000498497 MCF2P10911 925 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 PRKACAP17612 351 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 MAP4P27816 1152 aaKnown RBP12.11□□□□□ -0.47
PBX1-211ENST00000498497 CASP4P49662 377 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 CDK9P50750 372 aaKnown RBP12.11□□□□□ -0.47
PBX1-211ENST00000498497 RAP1GDS1P52306 607 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 ESRRGP62508 458 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 DLG2Q15700 870 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 PXDC1Q5TGL8 231 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 SDE2Q6IQ49 451 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 SLC13A5Q86YT5 568 aaPredicted RBP12.11□□□□□ -0.47
PBX1-211ENST00000498497 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 TTC13Q8NBP0 860 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 PPP1R14CQ8TAE6 165 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 ZNF398Q8TD17 642 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 DENND1AQ8TEH3 1009 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 NLRP7Q8WX94 980 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 FIG4Q92562 907 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 C17orf80Q9BSJ5 609 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 TAGLN3Q9UI15 199 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 ERVK-11Q9UQG0 969 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 POMPQ9Y244 141 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 GOLGA8QA0A0J9YX86 632 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 PLOD2O00469 737 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 SNPHO15079 494 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 PLSCR1O15162 318 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 COL6A1P12109 1028 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 CD1EP15812 388 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 ACOT2P49753 483 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 SNAP47Q5SQN1 464 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 GJC2Q5T442 439 aaPredicted RBP12.11□□□□□ -0.47
PBX1-211ENST00000498497 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 C7orf43Q8WVR3 580 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 FAM89AQ96GI7 184 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 NRDE2Q9H7Z3 1164 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 ACSS2Q9NR19 701 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 UGT2A1Q9Y4X1 527 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 PCDHGA11Q9Y5H2 935 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 PCDHA3Q9Y5H8 950 aa12.11□□□□□ -0.47
PBX1-211ENST00000498497 SYNGAP1Q96PV0 1343 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 ARHGEF37A1IGU5 675 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 HNRNPCL1O60812 293 aaKnown RBP12.1□□□□□ -0.47
PBX1-211ENST00000498497 FTLP02792 175 aaPredicted RBP12.1□□□□□ -0.47
PBX1-211ENST00000498497 DLDP09622 509 aaKnown RBP12.1□□□□□ -0.47
PBX1-211ENST00000498497 HOXC9P31274 260 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 SSTR3P32745 418 aaPredicted RBP12.1□□□□□ -0.47
PBX1-211ENST00000498497 HSPA2P54652 639 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 MRPS15P82914 257 aaKnown RBP12.1□□□□□ -0.47
PBX1-211ENST00000498497 PDIA6Q15084 440 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 RARS2Q5T160 578 aaKnown RBP12.1□□□□□ -0.47
PBX1-211ENST00000498497 VWA5B1Q5TIE3 1220 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 LYPD8Q6UX82 237 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 GATAD2AQ86YP4 633 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 SNX19Q92543 992 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 TTC25Q96NG3 672 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 HERPUD2Q9BSE4 406 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 CNNM1Q9NRU3 951 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 GINM1Q9NU53 330 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 EPS15L1Q9UBC2 864 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 KLHL3Q9UH77 587 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 SOX13Q9UN79 622 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 USTQ9Y2C2 406 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 MTO1Q9Y2Z2 717 aaKnown RBP12.1□□□□□ -0.47
PBX1-211ENST00000498497 ZNF536O15090 1300 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 FLT4P35916 1363 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 AURKAO14965 403 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 MUTP22033 750 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 GRM5P41594 1212 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 TFDP1Q14186 410 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 SPDYCQ5MJ68 293 aa12.1□□□□□ -0.47
PBX1-211ENST00000498497 FAM26FQ5R3K3 315 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms