RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SPATA17Q96L03 361 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 SYT15Q9BQS2 421 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 ARHGEF4Q9NR80 690 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 EHD2Q9NZN4 543 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 SLC6A14Q9UN76 642 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 EXOC7Q9UPT5 735 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 CPQQ9Y646 472 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 PKD1L2Q7Z442 2459 aa14.9□□□□□ -0.02
CCDC58-207ENST00000498466 AP5Z1O43299 807 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 OPHN1O60890 802 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 ADH1CP00326 375 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 LDHAP00338 332 aaKnown RBP14.89□□□□□ -0.03
CCDC58-207ENST00000498466 TMEM191BP0C7N4 346 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 HOXD12P35452 270 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 DDIT3P35638 169 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 GRIA2P42262 883 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 SLC7A9P82251 487 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 RPL6Q02878 288 aaKnown RBP14.89□□□□□ -0.03
CCDC58-207ENST00000498466 KCNA1Q09470 495 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 DUOXA1Q1HG43 343 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 SOWAHAQ2M3V2 549 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 PEAR1Q5VY43 1037 aaPredicted RBP14.89□□□□□ -0.03
CCDC58-207ENST00000498466 C12orf40Q86WS4 652 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 CHCHD4Q8N4Q1 142 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 DEFB119Q8N690 84 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 KIAA1958Q8N8K9 716 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 CXorf38Q8TB03 319 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 ACCSQ96QU6 501 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 MTMR12Q9C0I1 747 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 RNF38Q9H0F5 515 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 MRPL44Q9H9J2 332 aaKnown RBP14.89□□□□□ -0.03
CCDC58-207ENST00000498466 CDH9Q9ULB4 789 aa14.89□□□□□ -0.03
CCDC58-207ENST00000498466 GOLGA8IPA6NC78 632 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 ZNF840PA6NDX5 716 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 GOLGA8JA6NMD2 632 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.88□□□□□ -0.03
CCDC58-207ENST00000498466 ADAM23O75077 832 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 PPP1R37O75864 691 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 ADH5P11766 374 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 LMO2P25791 158 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 LONP1P36776 959 aaKnown RBP14.88□□□□□ -0.03
CCDC58-207ENST00000498466 TNFRSF4P43489 277 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 KIR2DL1P43626 348 aaPredicted RBP14.88□□□□□ -0.03
CCDC58-207ENST00000498466 PPP3CCP48454 512 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 FAM193AP78312 1265 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 GRIN1Q05586 938 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 MYO1EQ12965 1108 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 MAPRE1Q15691 268 aaKnown RBP14.88□□□□□ -0.03
CCDC58-207ENST00000498466 RHBDF2Q6PJF5 856 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 CEP295NLQ96MC4 621 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 CRTAC1Q9NQ79 661 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 TBC1D7Q9P0N9 293 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 CFAP97Q9P2B7 532 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 SIX4Q9UIU6 781 aa14.88□□□□□ -0.03
CCDC58-207ENST00000498466 ANKRD11Q6UB99 2663 aaPredicted RBP14.88□□□□□ -0.03
CCDC58-207ENST00000498466 ITPR1Q14643 2758 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 TBC1D3BA6NDS4 549 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 TAF4O00268 1085 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 TRIM66O15016 1216 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 GCNT3O95395 438 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 SERPINF2P08697 491 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 PDGFRBP09619 1106 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 CHRM1P11229 460 aaPredicted RBP14.87□□□□□ -0.03
CCDC58-207ENST00000498466 ZNF423Q2M1K9 1284 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 L1TD1Q5T7N2 865 aaKnown RBP14.87□□□□□ -0.03
CCDC58-207ENST00000498466 SLC36A4Q6YBV0 504 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 DPH6Q7L8W6 267 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 RABEPKQ7Z6M1 372 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 PROSER1Q86XN7 944 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 SYCP3Q8IZU3 236 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 MINDY1Q8N5J2 469 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 KBTBD7Q8WVZ9 684 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 HPDLQ96IR7 371 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 ANKRD36BP1Q96IX9 119 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 TTLL2Q9BWV7 592 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 STRA6Q9BX79 667 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 PDE11AQ9HCR9 933 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 SEL1LQ9UBV2 794 aa14.87□□□□□ -0.03
CCDC58-207ENST00000498466 A0A0A0MRY4 1105 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 FAM221BA6H8Z2 402 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 F8VP50 259 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 OLFM2O95897 454 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 OAS1P00973 400 aaKnown RBP14.86□□□□□ -0.03
CCDC58-207ENST00000498466 MBL2P11226 248 aaPredicted RBP14.86□□□□□ -0.03
CCDC58-207ENST00000498466 GARTP22102 1010 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 NOP14P78316 857 aaKnown RBP14.86□□□□□ -0.03
CCDC58-207ENST00000498466 ZNF33AQ06730 810 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 IFRD2Q12894 506 aaPredicted RBP14.86□□□□□ -0.03
CCDC58-207ENST00000498466 TAF10Q12962 218 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 HNRNPDQ14103 355 aaKnown RBP14.86□□□□□ -0.03
CCDC58-207ENST00000498466 LY6G5CQ5SRR4 150 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 TDRD10Q5VZ19 366 aaKnown RBP14.86□□□□□ -0.03
CCDC58-207ENST00000498466 BTBD8Q5XKL5 378 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 TRMT11Q7Z4G4 463 aaKnown RBP14.86□□□□□ -0.03
CCDC58-207ENST00000498466 DDX42Q86XP3 938 aaKnown RBP eCLIP14.86□□□□□ -0.03
CCDC58-207ENST00000498466 ZNF513Q8N8E2 541 aaPredicted RBP14.86□□□□□ -0.03
CCDC58-207ENST00000498466 NAT16Q8N8M0 369 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 OR2I1PQ8NGU4 316 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 PCED1BQ96HM7 432 aa14.86□□□□□ -0.03
CCDC58-207ENST00000498466 SLITRK1Q96PX8 696 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms