RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 RGL4Q8IZJ4 473 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 TRIML1Q8N9V2 468 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 CDK5RAP3Q96JB5 506 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 SPATA17Q96L03 361 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 CEP295NLQ96MC4 621 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 PNMA5Q96PV4 448 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 PLIN2Q99541 437 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 PKMYT1Q99640 499 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 ZDHHC5Q9C0B5 715 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 ZDHHC4Q9NPG8 344 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 CACNA2D2Q9NY47 1150 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 EHD2Q9NZN4 543 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 AGO2Q9UKV8 859 aaKnown RBP13.55□□□□□ -0.24
TRIM27-207ENST00000498117 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 PCDHB6Q9Y5E3 794 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 CELSR3Q9NYQ7 3312 aa13.55□□□□□ -0.24
TRIM27-207ENST00000498117 PCDH15Q96QU1 1955 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 IGHV1OR15-9A0A0B4J2B8 117 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 TRAK2O60296 914 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 FAM13AO94988 1023 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 IL18RAPO95256 599 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 ADH5P11766 374 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 PCSK1P29120 753 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 PPP3CCP48454 512 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 TOB1P50616 345 aaPredicted RBP13.54□□□□□ -0.24
TRIM27-207ENST00000498117 KDSRQ06136 332 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 C4orf50Q6ZRC1 276 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 DENND5BQ6ZUT9 1274 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 TMPRSS7Q7RTY8 843 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 SLCO6A1Q86UG4 719 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 C12orf40Q86WS4 652 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 SLC41A1Q8IVJ1 513 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 SPRYD3Q8NCJ5 442 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 ZNF419Q96HQ0 510 aaPredicted RBP13.54□□□□□ -0.24
TRIM27-207ENST00000498117 HSPA12BQ96MM6 686 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 PARVGQ9HBI0 331 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 CALCOCO1Q9P1Z2 691 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 TBC1D14Q9P2M4 693 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 TCHHQ07283 1943 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 PLXNB3Q9ULL4 1909 aa13.54□□□□□ -0.24
TRIM27-207ENST00000498117 ANAPC1Q9H1A4 1944 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 ZNF840PA6NDX5 716 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 ANKRD63C9JTQ0 380 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
TRIM27-207ENST00000498117 ZNF131P52739 623 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 GTF2BQ00403 316 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 GAD2Q05329 585 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 BTBD8Q5XKL5 378 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 FAM171BQ6P995 826 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 VSTM1Q6UX27 236 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 DDX42Q86XP3 938 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM27-207ENST00000498117 ZNF513Q8N8E2 541 aaPredicted RBP13.53□□□□□ -0.24
TRIM27-207ENST00000498117 CACTINQ8WUQ7 758 aaKnown RBP13.53□□□□□ -0.24
TRIM27-207ENST00000498117 FOXJ1Q92949 421 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 UBL7Q96S82 380 aaPredicted RBP13.53□□□□□ -0.24
TRIM27-207ENST00000498117 REEP2Q9BRK0 252 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 RNF38Q9H0F5 515 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 MAGEC2Q9UBF1 373 aaPredicted RBP13.53□□□□□ -0.24
TRIM27-207ENST00000498117 AGAP1Q9UPQ3 857 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 CPQQ9Y646 472 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 STYXL1Q9Y6J8 313 aa13.53□□□□□ -0.24
TRIM27-207ENST00000498117 CEP192Q8TEP8 1941 aa13.52□□□□□ -0.24
TRIM27-207ENST00000498117 TK2O00142 265 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
TRIM27-207ENST00000498117 GABRDO14764 452 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 CBFA2T3O75081 653 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 NDUFS2O75306 463 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 OLFM2O95897 454 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 HOXB2P14652 356 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 NTSR1P30989 418 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 GRIK1P39086 918 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 NEK4P51957 841 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 TFAMQ00059 246 aaKnown RBP13.52□□□□□ -0.25
TRIM27-207ENST00000498117 ST3GAL1Q11201 340 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 POSTNQ15063 836 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 WDR45BQ5MNZ6 344 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 LY6G5CQ5SRR4 150 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 SDE2Q6IQ49 451 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 OSTM1Q86WC4 334 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 GPBP1Q86WP2 473 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 SCUBE3Q8IX30 993 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 PHTF2Q8N3S3 785 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 TOP6BLQ8N6T0 577 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 LRRC52Q8N7C0 313 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 SETD7Q8WTS6 366 aaKnown RBP13.52□□□□□ -0.25
TRIM27-207ENST00000498117 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.25
TRIM27-207ENST00000498117 SMPD4Q9NXE4 827 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 CFAP97Q9P2B7 532 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 DEC1Q9P2X7 70 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 PCOLCE2Q9UKZ9 415 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 CYP8B1Q9UNU6 501 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 SNX9Q9Y5X1 595 aa13.52□□□□□ -0.25
TRIM27-207ENST00000498117 GOLGA4Q13439 2230 aaKnown RBP13.52□□□□□ -0.25
TRIM27-207ENST00000498117 A0A087WV48 116 aa13.51□□□□□ -0.25
TRIM27-207ENST00000498117 SCAMP3O14828 347 aaKnown RBP13.51□□□□□ -0.25
TRIM27-207ENST00000498117 ABL1P00519 1130 aa13.51□□□□□ -0.25
TRIM27-207ENST00000498117 ITGB3P05106 788 aa13.51□□□□□ -0.25
TRIM27-207ENST00000498117 ANXA13P27216 316 aa13.51□□□□□ -0.25
TRIM27-207ENST00000498117 HMGN5P82970 282 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms