RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 CYP4F3Q08477 520 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 TOB2Q14106 344 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 STARD3Q14849 445 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 CRY1Q16526 586 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 DPY19L1Q2PZI1 675 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 TRIM60Q495X7 471 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 HSF5Q4G112 596 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 AGAP9Q5VTM2 703 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 CDKAL1Q5VV42 579 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 NFRKBQ6P4R8 1299 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 BLOC1S2Q6QNY1 142 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 DAAM2Q86T65 1068 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 TDHQ8IZJ6 230 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 ZNF527Q8NB42 609 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 DTWD2Q8NBA8 298 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 AGBL5Q8NDL9 886 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 PPTC7Q8NI37 304 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 COPS5Q92905 334 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 HSPA12BQ96MM6 686 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 PPP1R16BQ96T49 567 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 MYL10Q9BUA6 226 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 RNF26Q9BY78 433 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 GPR62Q9BZJ7 368 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 TRIT1Q9H3H1 467 aaKnown RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 PCIF1Q9H4Z3 704 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 RETREG1Q9H6L5 497 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 SH3GLB2Q9NR46 395 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 SEC63Q9UGP8 760 aaKnown RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 KCNG1Q9UIX4 513 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 MYH15Q9Y2K3 1946 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 COL6A3P12111 3177 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 KIAA1671Q9BY89 1806 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 MYO7AQ13402 2215 aa6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 PRRC2BQ5JSZ5 2229 aaKnown RBP6.48□□□□□ -1.37
TMEM39A-212ENST00000497993 FNDC1Q4ZHG4 1894 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 SLC12A8A0AV02 714 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 TRIM43BA6NCK2 446 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 KPNA5O15131 536 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 IRAK2O43187 625 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 KRT37O76014 449 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 GH1P01241 217 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 MMP3P08254 477 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 ENPP1P22413 925 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 CCND2P30279 289 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 MTNR1BP49286 362 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 MRPS9P82933 396 aaKnown RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 TLE2Q04725 743 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 PKN1Q16512 942 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 PFKFB3Q16875 520 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 CCDC92Q53HC0 331 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 ARHGEF16Q5VV41 709 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 ARMC3Q5W041 872 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 MCTP2Q6DN12 878 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 FAM109BQ6ICB4 259 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 IQCEQ6IPM2 695 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 SYDE1Q6ZW31 735 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 RUFY3Q7L099 469 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 NIPA1Q7RTP0 329 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 ZSCAN30Q86W11 494 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 MICU3Q86XE3 530 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 ZZZ3Q8IYH5 903 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 SYTL1Q8IYJ3 562 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 PRR18Q8N4B5 295 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 KIAA1958Q8N8K9 716 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 FLCNQ8NFG4 579 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 IL31RAQ8NI17 732 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 SLC30A5Q8TAD4 765 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 FRS2Q8WU20 508 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 TRIM43Q96BQ3 446 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 ZNF274Q96GC6 653 aaPredicted RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 CTAGE1Q96RT6 745 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 LSM14BQ9BX40 385 aaKnown RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 TMEM120AQ9BXJ8 343 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 AP1M1Q9BXS5 423 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 LRRC2Q9BYS8 371 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 ZMYND12Q9H0C1 365 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 AP5M1Q9H0R1 490 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 SEMA3GQ9NS98 782 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 CATSPERZQ9NTU4 200 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 BARHL2Q9NY43 387 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 SNX13Q9Y5W8 968 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 DDX49Q9Y6V7 483 aaKnown RBP6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 MYH11P35749 1972 aa6.47□□□□□ -1.37
TMEM39A-212ENST00000497993 COL4A4P53420 1690 aaPredicted RBP6.46□□□□□ -1.37
TMEM39A-212ENST00000497993 KLF18A0A0U1RQI7 1052 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 STXBP3O00186 592 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 EIF3FO00303 357 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 AREL1O15033 823 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 FFAR2O15552 330 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 DHX16O60231 1041 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 SKAP2O75563 359 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 TIMP1P01033 207 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 TXNP10599 105 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 SRFP11831 508 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 NCAM1P13591 858 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 MTHFD2P13995 350 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 SLC9A1P19634 815 aa6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 CASTP20810 708 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 UBA1P22314 1058 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-212ENST00000497993 CD40P25942 277 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms