RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ABL1P00519 1130 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 CCDC192P0DO97 292 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 YWHAQP27348 245 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 CTHP32929 405 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 SOX9P48436 509 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 TNK2Q07912 1038 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 INCA1Q0VD86 236 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 TAF10Q12962 218 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 ORC1Q13415 861 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 PDGFRLQ15198 375 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 TPD52L1Q16890 204 aaPredicted RBP16.26■□□□□ 0.19
NUP50-219ENST00000497960 ZSCAN23Q3MJ62 389 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 WDR44Q5JSH3 913 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 TTI2Q6NXR4 508 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 C11orf57Q6ZUT1 292 aaPredicted RBP16.26■□□□□ 0.19
NUP50-219ENST00000497960 FRMD5Q7Z6J6 570 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 ZC3H3Q8IXZ2 948 aaKnown RBP16.26■□□□□ 0.19
NUP50-219ENST00000497960 FUKQ8N0W3 1084 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 FAXDC2Q96IV6 333 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 KCNK16Q96T55 309 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 FAM83CQ9BQN1 747 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 NT5C1AQ9BXI3 368 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 LMAN1LQ9HAT1 526 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 KRT82Q9NSB4 513 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 TMEM30AQ9NV96 361 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 RAB20Q9NX57 234 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 GCNT4Q9P109 453 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 HMGXB4Q9UGU5 601 aa16.26■□□□□ 0.19
NUP50-219ENST00000497960 ARMCX3Q9UH62 379 aaPredicted RBP16.26■□□□□ 0.19
NUP50-219ENST00000497960 GFRA3O60609 400 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 SP9P0CG40 484 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 CCDC130P13994 396 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 CD58P19256 250 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 AMPD2Q01433 879 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 FZD5Q13467 585 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 LRRC32Q14392 662 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 MTF1Q14872 753 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 FOXR2Q6PJQ5 311 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 PAQR9Q6ZVX9 377 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 ZNF687Q8N1G0 1237 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 TTC39CQ8N584 583 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 PDZD8Q8NEN9 1154 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 SLC2A14Q8TDB8 520 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 NKD2Q969F2 451 aaPredicted RBP16.25■□□□□ 0.19
NUP50-219ENST00000497960 FBXO32Q969P5 355 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 CEP63Q96MT8 703 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 SLC22A12Q96S37 553 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 IER2Q9BTL4 223 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 CHRDQ9H2X0 955 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 EBF3Q9H4W6 596 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 METTL14Q9HCE5 456 aaKnown RBP16.25■□□□□ 0.19
NUP50-219ENST00000497960 FAM49BQ9NUQ9 324 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 ARHGAP26Q9UNA1 814 aa16.25■□□□□ 0.19
NUP50-219ENST00000497960 ZFHX2Q9C0A1 2572 aaPredicted RBP16.25■□□□□ 0.19
NUP50-219ENST00000497960 GREB1Q4ZG55 1949 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 CILPO75339 1184 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 FGFR1OPO95684 399 aaKnown RBP16.24■□□□□ 0.19
NUP50-219ENST00000497960 FAM200BP0CF97 657 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 ERCC5P28715 1186 aaPredicted RBP16.24■□□□□ 0.19
NUP50-219ENST00000497960 IFNAR2P48551 515 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 SLC5A3P53794 718 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 RUNX3Q13761 415 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 ZNF77Q15935 545 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 CCDC40Q4G0X9 1142 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 ANO6Q4KMQ2 910 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 CT47A1Q5JQC4 288 aaPredicted RBP16.24■□□□□ 0.19
NUP50-219ENST00000497960 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 ZC3H14Q6PJT7 736 aaKnown RBP16.24■□□□□ 0.19
NUP50-219ENST00000497960 C12orf29Q8N999 325 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 SH3RF2Q8TEC5 729 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 OVCA2Q8WZ82 227 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 SEMA4DQ92854 862 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 DUSP9Q99956 384 aaKnown RBP16.24■□□□□ 0.19
NUP50-219ENST00000497960 COMMD8Q9NX08 183 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 DUS2Q9NX74 493 aaKnown RBP16.24■□□□□ 0.19
NUP50-219ENST00000497960 FBXO4Q9UKT5 387 aa16.24■□□□□ 0.19
NUP50-219ENST00000497960 FAM186AA6NE01 2351 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 OBSL1O75147 1896 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 CHRNB1P11230 501 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 TCF3P15923 654 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 ADORA2BP29275 332 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 MAP3K7CLP57077 242 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 CSTF1Q05048 431 aaKnown RBP16.23■□□□□ 0.19
NUP50-219ENST00000497960 USP4Q13107 963 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 MTAPQ13126 283 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 ZNF528Q3MIS6 628 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 DGKKQ5KSL6 1271 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 TXNDC11Q6PKC3 985 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 FILIP1Q7Z7B0 1213 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 CPA6Q8N4T0 437 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 SCAMP5Q8TAC9 235 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 RIN3Q8TB24 985 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 OSCP1Q8WVF1 389 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 CYFIP2Q96F07 1278 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 TWNKQ96RR1 684 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 HNRNPABQ99729 332 aaKnown RBP16.23■□□□□ 0.19
NUP50-219ENST00000497960 SMOQ99835 787 aa16.23■□□□□ 0.19
NUP50-219ENST00000497960 NAT10Q9H0A0 1025 aaKnown RBP16.23■□□□□ 0.19
NUP50-219ENST00000497960 SEMA4AQ9H3S1 761 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms