RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 AGR3Q8TD06 166 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 DCAKDQ8WVC6 231 aa13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 HERC5Q9UII4 1024 aaKnown RBP13.61□□□□□ -0.23
GAPVD1-220ENST00000497580 TAF1P21675 1872 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 TNFAIP8O95379 198 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 CLEC16AQ2KHT3 1053 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 CBWD2Q8IUF1 395 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 PDIK1LQ8N165 341 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 TAS1R2Q8TE23 839 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 RSAD2Q8WXG1 361 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 P2RX7Q99572 595 aaKnown RBP13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 SENP6Q9GZR1 1112 aaPredicted RBP13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 PAIP1Q9H074 479 aaKnown RBP13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 ACSS3Q9H6R3 686 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 ZDHHC7Q9NXF8 308 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 CDH22Q9UJ99 828 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 SNED1Q8TER0 1413 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 NOP56O00567 594 aaKnown RBP13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 PROSCO94903 275 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 FAM58BPP0C7Q3 252 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 TMED10P49755 219 aaKnown RBP13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 GSTO1P78417 241 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 BTG3Q14201 252 aaPredicted RBP13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 TTC13Q8NBP0 860 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 PPP4R1Q8TF05 950 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 POMGNT1Q8WZA1 660 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 PPP1R36Q96LQ0 422 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 MRPS26Q9BYN8 205 aaKnown RBP13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 DNAJA2O60884 412 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 WEE2P0C1S8 567 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 HALP42357 657 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 MYBPC1Q00872 1141 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 NRF1Q16656 503 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 DOK7Q18PE1 504 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 ALLCQ8N6M5 410 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 ZFRQ96KR1 1074 aaKnown RBP13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 BRD8Q9H0E9 1235 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 HSPBP1Q9NZL4 362 aa13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 XPO7Q9UIA9 1087 aaKnown RBP13.6□□□□□ -0.23
GAPVD1-220ENST00000497580 E2F8A0AVK6 867 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 RBP3P10745 1247 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 ELK3P41970 407 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 GDF10P55107 478 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 SMTNL2Q2TAL5 461 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 C1orf186Q6ZWK4 172 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 TMEM110Q86TL2 294 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 SLC35B4Q969S0 331 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 FAIMQ9NVQ4 179 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 RSL24D1Q9UHA3 163 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 APOBEC2Q9Y235 224 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 DNAJC16Q9Y2G8 782 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 ATRNL1Q5VV63 1379 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 SLIT2O94813 1529 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 KBTBD13C9JR72 458 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 TCN1P20061 433 aaPredicted RBP13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 SMARCA1P28370 1054 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 RARS2Q5T160 578 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 VWA5B1Q5TIE3 1220 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 LIN9Q5TKA1 542 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 XXYLT1Q8NBI6 393 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 CCDC106Q9BWC9 280 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 C20orf27Q9GZN8 174 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 GNEQ9Y223 722 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 TMEM247A6NEH6 219 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 AIM2O14862 343 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 AVILO75366 819 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 SF3B3Q15393 1217 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 FASTKD5Q7L8L6 764 aaKnown RBP13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 ZNF410Q86VK4 478 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 SHC3Q92529 594 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 MAML3Q96JK9 1138 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 DMAC2Q9NW81 257 aa13.59□□□□□ -0.23
GAPVD1-220ENST00000497580 COL4A1P02462 1669 aa13.58□□□□□ -0.23
GAPVD1-220ENST00000497580 DLEC1Q9Y238 1755 aa13.58□□□□□ -0.23
GAPVD1-220ENST00000497580 DGKIO75912 1065 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 CFHP08603 1231 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 CDH2P19022 906 aaPredicted RBP13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 NFKBIAP25963 317 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 CA8P35219 290 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 ETV4P43268 484 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 STX3Q13277 289 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 PSMD6Q15008 389 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 KYAT3Q6YP21 454 aaKnown RBP13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 ZFPM1Q8IX07 1006 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 PQLC1Q8N2U9 271 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 SHOC2Q9UQ13 582 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 ATF5Q9Y2D1 282 aaPredicted RBP13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 IVNS1ABPQ9Y6Y0 642 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 SPTLC1O15269 473 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 ADRB2P07550 413 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 SLC5A3P53794 718 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 GSTM4Q03013 218 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 SNAPC2Q13487 334 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 CES4AQ5XG92 561 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 TXNRD3NBQ6F5E7 133 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 C16orf46Q6P387 395 aa13.58□□□□□ -0.24
GAPVD1-220ENST00000497580 PTAR1Q7Z6K3 402 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms