RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 F8VZ95 297 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 TULP2O00295 520 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 RTN3O95197 1032 aaPredicted RBP17.13■□□□□ 0.33
FAM3A-220ENST00000497506 YWHAQP27348 245 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 GNA15P30679 374 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 SSTR3P32745 418 aaPredicted RBP17.13■□□□□ 0.33
FAM3A-220ENST00000497506 BCAT1P54687 386 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 UBASH3AP57075 661 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 JAM2P57087 298 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 CYP4F8P98187 520 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 PDE4CQ08493 712 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 ZNF606Q8WXB4 792 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 NLRC4Q9NPP4 1024 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 COMMD8Q9NX08 183 aa17.13■□□□□ 0.33
FAM3A-220ENST00000497506 ANHXE9PGG2 379 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 XPO1O14980 1071 aaKnown RBP17.12■□□□□ 0.33
FAM3A-220ENST00000497506 THAP12O43422 761 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 CFHP08603 1231 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 KIF11P52732 1056 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 BST2Q10589 180 aaKnown RBP17.12■□□□□ 0.33
FAM3A-220ENST00000497506 TAF10Q12962 218 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 GPR158Q5T848 1215 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 PIGZQ86VD9 579 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 SLC47A2Q86VL8 602 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 RNF135Q8IUD6 432 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 GCNAQ96QF7 691 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 COL25A1Q9BXS0 654 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-220ENST00000497506 SLC46A2Q9BY10 475 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 TASP1Q9H6P5 420 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 IFNKQ9P0W0 207 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 NUP210Q8TEM1 1887 aaPredicted RBP17.12■□□□□ 0.33
FAM3A-220ENST00000497506 MYO16Q9Y6X6 1858 aa17.12■□□□□ 0.33
FAM3A-220ENST00000497506 M0QYV0 167 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 MED7O43513 233 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 SETSIPP0DME0 302 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 PBX1P40424 430 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 PLA2G4AP47712 749 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 SLC8A3P57103 927 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 PTK2Q05397 1052 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 IFRD2Q12894 506 aaPredicted RBP17.11■□□□□ 0.33
FAM3A-220ENST00000497506 HTR4Q13639 388 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 MEA1Q16626 185 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 ARHGAP15Q53QZ3 475 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 RAB41Q5JT25 222 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 FAM78AQ5JUQ0 283 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 GAS2L3Q86XJ1 694 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 ST13P5Q8NFI4 369 aaPredicted RBP17.11■□□□□ 0.33
FAM3A-220ENST00000497506 SLC35F5Q8WV83 523 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 MRPS31Q92665 395 aaKnown RBP17.11■□□□□ 0.33
FAM3A-220ENST00000497506 SECISBP2LQ93073 1101 aaKnown RBP17.11■□□□□ 0.33
FAM3A-220ENST00000497506 USP3Q9Y6I4 520 aa17.11■□□□□ 0.33
FAM3A-220ENST00000497506 ZNF840PA6NDX5 716 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 SOBPA7XYQ1 873 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 GABBR2O75899 941 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 ASGR2P07307 311 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 ZDHHC11BP0C7U3 371 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 FCARP24071 287 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 SOX5P35711 763 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 GPD2P43304 727 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 PPP3CCP48454 512 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 BPIFB4P59827 614 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 TXNDC8Q6A555 127 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 DENND1BQ6P3S1 775 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 PARM1Q6UWI2 310 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 MON1AQ86VX9 555 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 ZSCAN18Q8TBC5 510 aaPredicted RBP17.1■□□□□ 0.33
FAM3A-220ENST00000497506 RSAD2Q8WXG1 361 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 OVCA2Q8WZ82 227 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 FGF14Q92915 247 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 SMARCD2Q92925 531 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 FBXO32Q969P5 355 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 ASB16Q96NS5 453 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 SLITRK1Q96PX8 696 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 RBSNQ9H1K0 784 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 FBXO44Q9H4M3 255 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 SLITRK6Q9H5Y7 841 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 KCNK12Q9HB15 430 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 TRPM5Q9NZQ8 1165 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 IGSF9Q9P2J2 1179 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 CHORDC1Q9UHD1 332 aaPredicted RBP17.1■□□□□ 0.33
FAM3A-220ENST00000497506 SCML2Q9UQR0 700 aa17.1■□□□□ 0.33
FAM3A-220ENST00000497506 CUL9Q8IWT3 2517 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 GFPT2O94808 682 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 CYP11B1P15538 503 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 DDX6P26196 483 aaKnown RBP eCLIP17.09■□□□□ 0.33
FAM3A-220ENST00000497506 WEE1P30291 646 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 STAT1P42224 750 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 PGFP49763 221 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 SNX30Q5VWJ9 437 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 TANGO2Q6ICL3 276 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 PMF1Q6P1K2 205 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 MTSS1LQ765P7 747 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 MAB21L3Q8N8X9 362 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 PDZD8Q8NEN9 1154 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 SPAG5Q96R06 1193 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 RPP25Q9BUL9 199 aaKnown RBP17.09■□□□□ 0.33
FAM3A-220ENST00000497506 XPO4Q9C0E2 1151 aaKnown RBP17.09■□□□□ 0.33
FAM3A-220ENST00000497506 TTYH3Q9C0H2 523 aa17.09■□□□□ 0.33
FAM3A-220ENST00000497506 TRPV4Q9HBA0 871 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms