RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 NPY5RQ15761 445 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 NRN1LQ496H8 165 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 GALNTL6Q49A17 601 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 DEPDC1Q5TB30 811 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 DCLRE1AQ6PJP8 1040 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 CYP20A1Q6UW02 462 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 DENND5BQ6ZUT9 1274 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 PLXDC1Q8IUK5 500 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 UNC45BQ8IWX7 931 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 THNSL1Q8IYQ7 743 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 ULK2Q8IYT8 1036 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 UNC5BQ8IZJ1 945 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 PIK3C3Q8NEB9 887 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 Q8NFD4 153 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 STON2Q8WXE9 905 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 JAKMIP2Q96AA8 810 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 TBC1D32Q96NH3 1257 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 FNBP1Q96RU3 617 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 PHF7Q9BWX1 381 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-224ENST00000497488 FTOQ9C0B1 505 aaKnown RBP eCLIP6.61□□□□□ -1.35
BRCA1-224ENST00000497488 TLR9Q9NR96 1032 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 DECR2Q9NUI1 292 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 RLIMQ9NVW2 624 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 ZDHHC7Q9NXF8 308 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 LMCD1Q9NZU5 365 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 CFAP97Q9P2B7 532 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 ARHGAP20Q9P2F6 1191 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 DKK4Q9UBT3 224 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 EBF1Q9UH73 591 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 DNAI1Q9UI46 699 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 CNOT7Q9UIV1 285 aaKnown RBP6.61□□□□□ -1.35
BRCA1-224ENST00000497488 CNTN6Q9UQ52 1028 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 TAF6LQ9Y6J9 622 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 FAM169AQ9Y6X4 670 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 ERCC6L2Q5T890 1561 aa6.61□□□□□ -1.35
BRCA1-224ENST00000497488 KDM3AQ9Y4C1 1321 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 NPIPB15A6NHN6 443 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 SAC3D1A6NKF1 404 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 H7C4K7 107 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 USP2O75604 605 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 CSPG5O95196 566 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 CCNDBP1O95273 360 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 LRG1P02750 347 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 PROCP04070 461 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 GNAI2P04899 355 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 ENO2P09104 434 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 SBK3P0C264 359 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 GAAP10253 952 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 GRK5P34947 590 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 CRHR1P34998 444 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 CD86P42081 329 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 CDK7P50613 346 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 ZNF41P51814 821 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 UBXN2AP68543 259 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 PTP4A2Q12974 167 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 STILQ15468 1287 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 ADIPOQQ15848 244 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 NFIL3Q16649 462 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 PABPC1LQ4VXU2 614 aaKnown RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 PARP10Q53GL7 1025 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 GRAMD4Q6IC98 578 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 ALKBH5Q6P6C2 394 aaKnown RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 BEND4Q6ZU67 534 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 ARHGAP27Q6ZUM4 889 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 TAS1R1Q7RTX1 841 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 GALNT7Q86SF2 657 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 SCML4Q8N228 414 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 FAM181AQ8N9Y4 354 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 NUP43Q8NFH3 380 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 LILRB1Q8NHL6 650 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 WDR48Q8TAF3 677 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 GDAP1Q8TB36 358 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 IGDCC4Q8TDY8 1250 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 RAPGEF4Q8WZA2 1011 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 KTI12Q96EK9 354 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 SCARF2Q96GP6 870 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 PLVAPQ9BX97 442 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 C11orf54Q9H0W9 315 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 RANBP17Q9H2T7 1088 aaKnown RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 NDST4Q9H3R1 872 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 ATP13A1Q9HD20 1204 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 TRMT1Q9NXH9 659 aaKnown RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 DTLQ9NZJ0 730 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 MAGEL2Q9UJ55 1249 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 HDAC5Q9UQL6 1122 aa6.6□□□□□ -1.35
BRCA1-224ENST00000497488 RUVBL1Q9Y265 456 aaKnown RBP6.6□□□□□ -1.35
BRCA1-224ENST00000497488 PITPNM2Q9BZ72 1349 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 A0A1W2PQJ5 194 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 J3KTA2 159 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 TNPO2O14787 897 aaKnown RBP6.59□□□□□ -1.35
BRCA1-224ENST00000497488 TSPAN4O14817 238 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 CCP110O43303 1012 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 SRGAP2O75044 1071 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 GUCY1B2O75343 617 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 SLU7O95391 586 aaKnown RBP6.59□□□□□ -1.35
BRCA1-224ENST00000497488 VIPP01282 170 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 CEACAM5P06731 702 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 ALAS1P13196 640 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 DESP17661 470 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms