RNA–Protein interactions for RNA: ENST00000497210.5

CTPS1-211, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-211ENST00000497210 ARHGAP6O43182 974 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 B4GALT3O60512 393 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 ACO1P21399 889 aaKnown RBP10.31□□□□□ -0.76
CTPS1-211ENST00000497210 TARSP26639 723 aaKnown RBP10.31□□□□□ -0.76
CTPS1-211ENST00000497210 GNL1P36915 607 aaPredicted RBP10.31□□□□□ -0.76
CTPS1-211ENST00000497210 ZNF132P52740 706 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 NDST1P52848 882 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 SLC8A3P57103 927 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 SHHQ15465 462 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 SOWAHAQ2M3V2 549 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 USP41Q3LFD5 358 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 TIGD5Q53EQ6 642 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 SGO2Q562F6 1265 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 C9orf50Q5SZB4 431 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 KIAA1841Q6NSI8 718 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 TRIM72Q6ZMU5 477 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 CCDC170Q8IYT3 715 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 TDHQ8IZJ6 230 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 SLC39A11Q8N1S5 342 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 UBR7Q8N806 425 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 MSANTD4Q8NCY6 345 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 KAT5Q92993 513 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 TMEM176AQ96HP8 235 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 CCDC42Q96M95 316 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 TTPALQ9BTX7 342 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 C11orf84Q9BUA3 381 aaPredicted RBP10.31□□□□□ -0.76
CTPS1-211ENST00000497210 HERC2P3Q9BVR0 1158 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 GPR88Q9GZN0 384 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 PDCL3Q9H2J4 239 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 DDX43Q9NXZ2 648 aaKnown RBP10.31□□□□□ -0.76
CTPS1-211ENST00000497210 ZFATQ9P243 1243 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
CTPS1-211ENST00000497210 CDH9Q9ULB4 789 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 CNTN6Q9UQ52 1028 aa10.31□□□□□ -0.76
CTPS1-211ENST00000497210 GBF1Q92538 1859 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.3□□□□□ -0.76
CTPS1-211ENST00000497210 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.3□□□□□ -0.76
CTPS1-211ENST00000497210 OR6C75A6NL08 312 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 FOXN3O00409 490 aaPredicted RBP10.3□□□□□ -0.76
CTPS1-211ENST00000497210 CYP26A1O43174 497 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 THAP12O43422 761 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 AKR1B10O60218 316 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 CPNE3O75131 537 aaKnown RBP10.3□□□□□ -0.76
CTPS1-211ENST00000497210 SOD2P04179 222 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 ITGB1P05556 798 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 VDRP11473 427 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 CD19P15391 556 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 CYP11B1P15538 503 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 PBX3P40426 434 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 BRCC3P46736 316 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 GLUD2P49448 558 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 CTBSQ01459 385 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 MLLT1Q03111 559 aaPredicted RBP10.3□□□□□ -0.76
CTPS1-211ENST00000497210 UBE3AQ05086 875 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 ZNF394Q53GI3 561 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 HS1BP3Q53T59 392 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 FAM171A1Q5VUB5 890 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 WSCD1Q658N2 575 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 LIMS2Q7Z4I7 341 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 LRRC8AQ8IWT6 810 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 B3GALNT2Q8NCR0 500 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 KBTBD7Q8WVZ9 684 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 RABGGTAQ92696 567 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 NOX5Q96PH1 765 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 SYT15Q9BQS2 421 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 MRPL45Q9BRJ2 306 aaKnown RBP10.3□□□□□ -0.76
CTPS1-211ENST00000497210 SDCBP2Q9H190 292 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.3□□□□□ -0.76
CTPS1-211ENST00000497210 SEPT11Q9NVA2 429 aaKnown RBP10.3□□□□□ -0.76
CTPS1-211ENST00000497210 HESX1Q9UBX0 185 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 LZTS1Q9Y250 596 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 STXBP5LQ9Y2K9 1186 aa10.3□□□□□ -0.76
CTPS1-211ENST00000497210 A0A1W2PPC1 479 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 I3L4J1 428 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 GABRDO14764 452 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 CCP110O43303 1012 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 LPXNO60711 386 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 FGF18O76093 207 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 LSM8O95777 96 aaKnown RBP10.29□□□□□ -0.76
CTPS1-211ENST00000497210 RB1P06400 928 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 PNMA6AP0CW24 399 aaPredicted RBP10.29□□□□□ -0.76
CTPS1-211ENST00000497210 VSIG8P0DPA2 414 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 RARAP10276 462 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 NFKB1P19838 968 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 TKTP29401 623 aaKnown RBP10.29□□□□□ -0.76
CTPS1-211ENST00000497210 CDH8P55286 799 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 CDR2Q01850 454 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 SMARCB1Q12824 385 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 GAS6Q14393 721 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 SPA17Q15506 151 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 NFE2Q16621 373 aaPredicted RBP10.29□□□□□ -0.76
CTPS1-211ENST00000497210 C4orf50Q6ZRC1 276 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 RAB44Q7Z6P3 723 aaPredicted RBP10.29□□□□□ -0.76
CTPS1-211ENST00000497210 DDX53Q86TM3 631 aaKnown RBP10.29□□□□□ -0.76
CTPS1-211ENST00000497210 SLC47A2Q86VL8 602 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 CEP57Q86XR8 500 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 DCP1BQ8IZD4 617 aaKnown RBP10.29□□□□□ -0.76
CTPS1-211ENST00000497210 TMEM130Q8N3G9 435 aa10.29□□□□□ -0.76
CTPS1-211ENST00000497210 ELMO3Q96BJ8 720 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms