RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FKBP10Q96AY3 582 aa5.69□□□□□ -1.5
VPS36-206ENST00000497149 ZBTB45Q96K62 511 aaPredicted RBP5.69□□□□□ -1.5
VPS36-206ENST00000497149 C17orf80Q9BSJ5 609 aa5.69□□□□□ -1.5
VPS36-206ENST00000497149 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS36-206ENST00000497149 PCDHAC1Q9H158 963 aa5.69□□□□□ -1.5
VPS36-206ENST00000497149 CYP4F11Q9HBI6 524 aa5.69□□□□□ -1.5
VPS36-206ENST00000497149 ZBTB26Q9HCK0 441 aa5.69□□□□□ -1.5
VPS36-206ENST00000497149 NECTIN3Q9NQS3 549 aa5.69□□□□□ -1.5
VPS36-206ENST00000497149 ZMYND8Q9ULU4 1186 aaPredicted RBP5.69□□□□□ -1.5
VPS36-206ENST00000497149 MAGED2Q9UNF1 606 aaPredicted RBP5.69□□□□□ -1.5
VPS36-206ENST00000497149 A1L4Q6 167 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 WDR27A2RRH5 827 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 ADM5C9JUS6 153 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 SLC16A3O15427 465 aaKnown RBP5.68□□□□□ -1.5
VPS36-206ENST00000497149 COQ9O75208 318 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 HGFP14210 728 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 TNFRSF1AP19438 455 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 TGM1P22735 817 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 MCM7P33993 719 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 TRAPPC10P48553 1259 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 GATMP50440 423 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 EIF2B5Q13144 721 aaKnown RBP5.68□□□□□ -1.5
VPS36-206ENST00000497149 PUM1Q14671 1186 aaKnown RBP eCLIP5.68□□□□□ -1.5
VPS36-206ENST00000497149 PUM3Q15397 648 aaKnown RBP5.68□□□□□ -1.5
VPS36-206ENST00000497149 RAB30Q15771 203 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 GRAMD1BQ3KR37 738 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 FAXCQ5TGI0 409 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 RAP1GAP2Q684P5 730 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 GGT6Q6P531 493 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 MAVSQ7Z434 540 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 CCDC28AQ8IWP9 274 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 SMC5Q8IY18 1101 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 ULK2Q8IYT8 1036 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 LINC00476Q8WZB0 136 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 GLG1Q92896 1179 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 MUL1Q969V5 352 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 ZNF668Q96K58 619 aaPredicted RBP5.68□□□□□ -1.5
VPS36-206ENST00000497149 COQ10AQ96MF6 247 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 ALG8Q9BVK2 526 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 GLOD4Q9HC38 313 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 DKK3Q9UBP4 350 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 DNAJB11Q9UBS4 358 aa5.68□□□□□ -1.5
VPS36-206ENST00000497149 GOLGA6L3A6NEY3 463 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 TCEA3O75764 348 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 ESRRBO95718 433 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 CHRM2P08172 466 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 ADH4P08319 380 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 EGR1P18146 543 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 EPHA3P29320 983 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 MPLP40238 635 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 AVPR1BP47901 424 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 PGDP52209 483 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 TIAL1Q01085 375 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS36-206ENST00000497149 ICA1Q05084 483 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 FSTL1Q12841 308 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 TRIM14Q14142 442 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 MAPKAPK3Q16644 382 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 NBPF8Q3BBV2 869 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.67□□□□□ -1.5
VPS36-206ENST00000497149 TREML2Q5T2D2 321 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 KAZNQ674X7 775 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 SLC9A4Q6AI14 798 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 MRNIPQ6NTE8 343 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 ERAP2Q6P179 960 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 Q6YL49 198 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 SLC44A3Q8N4M1 653 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 TFAP2BQ92481 460 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 LARP4BQ92615 738 aaKnown RBP5.67□□□□□ -1.5
VPS36-206ENST00000497149 ZDHHC12Q96GR4 267 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 HIST1H2AAQ96QV6 131 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 SLC25A32Q9H2D1 315 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 EHD3Q9NZN3 535 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 TMOD4Q9NZQ9 345 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 USP22Q9UPT9 525 aa5.67□□□□□ -1.5
VPS36-206ENST00000497149 EPN1Q9Y6I3 576 aaPredicted RBP5.67□□□□□ -1.5
VPS36-206ENST00000497149 PLEKHD1A6NEE1 506 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 AGPSO00116 658 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 IL6RP08887 468 aaPredicted RBP5.66□□□□□ -1.5
VPS36-206ENST00000497149 LIPAP38571 399 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 TIRAPP58753 221 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 MPP3Q13368 585 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 BMPR2Q13873 1038 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 PFKFB4Q16877 469 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 TXNRD1Q16881 649 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 SLC5A9Q2M3M2 681 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 TUBB8Q3ZCM7 444 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 ZNF618Q5T7W0 954 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 TEDDM1Q5T9Z0 273 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 CAVIN3Q969G5 261 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 RFKQ969G6 155 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 INO80BQ9C086 356 aaPredicted RBP5.66□□□□□ -1.5
VPS36-206ENST00000497149 IGSF9Q9P2J2 1179 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 VPS51Q9UID3 782 aa5.66□□□□□ -1.5
VPS36-206ENST00000497149 DRG1Q9Y295 367 aaKnown RBP5.66□□□□□ -1.5
VPS36-206ENST00000497149 GRID2IPA4D2P6 1211 aa5.65□□□□□ -1.5
VPS36-206ENST00000497149 CCNT2O60583 730 aaKnown RBP5.65□□□□□ -1.5
VPS36-206ENST00000497149 SNX2O60749 519 aa5.65□□□□□ -1.5
VPS36-206ENST00000497149 VNN1O95497 513 aa5.65□□□□□ -1.5
VPS36-206ENST00000497149 ONECUT2O95948 504 aa5.65□□□□□ -1.5
VPS36-206ENST00000497149 FESP07332 822 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms