RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 INO80BQ9C086 356 aaPredicted RBP13.52□□□□□ -0.24
VEGFA-215ENST00000497139 TUFT1Q9NNX1 390 aa13.52□□□□□ -0.24
VEGFA-215ENST00000497139 ACP6Q9NPH0 428 aa13.52□□□□□ -0.24
VEGFA-215ENST00000497139 VPS45Q9NRW7 570 aa13.52□□□□□ -0.24
VEGFA-215ENST00000497139 SCHIP1Q9P0W5 487 aaPredicted RBP13.52□□□□□ -0.24
VEGFA-215ENST00000497139 DNPEPQ9ULA0 475 aa13.52□□□□□ -0.24
VEGFA-215ENST00000497139 FRMPD2Q68DX3 1309 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-215ENST00000497139 GRIN3BO60391 1043 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-215ENST00000497139 LDHCP07864 332 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 ERFP50548 548 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 SLC25A3Q00325 362 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 ALCAMQ13740 583 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 OASLQ15646 514 aaKnown RBP13.52□□□□□ -0.25
VEGFA-215ENST00000497139 CCDC153Q494R4 210 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 ZNF677Q86XU0 584 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 PALM2Q8IXS6 379 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 ADGRF4Q8IZF3 695 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 LZTR1Q8N653 840 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 ARHGEF1Q92888 912 aaKnown RBP13.52□□□□□ -0.25
VEGFA-215ENST00000497139 KREMEN1Q96MU8 473 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 SRPK1Q96SB4 655 aaKnown RBP13.52□□□□□ -0.25
VEGFA-215ENST00000497139 STRA6Q9BX79 667 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 SLC2A11Q9BYW1 496 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 C12orf65Q9H3J6 166 aaKnown RBP13.52□□□□□ -0.25
VEGFA-215ENST00000497139 SMYD3Q9H7B4 428 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 COQ6Q9Y2Z9 468 aa13.52□□□□□ -0.25
VEGFA-215ENST00000497139 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 FUOMA2VDF0 154 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 SOBPA7XYQ1 873 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 SLITRK3O94933 977 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 C8BP07358 591 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 UNGP13051 313 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 SSTR1P30872 391 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 MXI1P50539 228 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 PPP3CAQ08209 521 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 NFX1Q12986 1120 aaKnown RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 HP1BP3Q5SSJ5 553 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 GPATCH4Q5T3I0 446 aaKnown RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 LPCAT2Q7L5N7 544 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 ANKMY2Q8IV38 441 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 SERAC1Q96JX3 654 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 FRMD8P1Q9BZ68 369 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 DHX33Q9H6R0 707 aaKnown RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 PLLPQ9Y342 182 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 DOT1LQ8TEK3 1739 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 MEI4A8MW99 385 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 EIF2S1P05198 315 aaKnown RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 INHBAP08476 426 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 ADRA2BP18089 450 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 HMOX2P30519 316 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 BCAP31P51572 246 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 ADGRE1Q14246 886 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 TGFBIQ15582 683 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 KRT39Q6A163 491 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 PPP1R2P3Q6NXS1 205 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 CLEC4GQ6UXB4 293 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 GLIS1Q8NBF1 620 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 RIN3Q8TB24 985 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 TGFBRAP1Q8WUH2 860 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 LRGUKQ96M69 825 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 KLF6Q99612 283 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-215ENST00000497139 TMEM117Q9H0C3 514 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 CDH7Q9ULB5 785 aa13.51□□□□□ -0.25
VEGFA-215ENST00000497139 LDHBP07195 334 aaKnown RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 THRAP10827 490 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 S100A1P23297 94 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 L1CAMP32004 1257 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 EPHB1P54762 984 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 SNRPFP62306 86 aaKnown RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 C16orf72Q14CZ0 275 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 WDR75Q8IWA0 830 aaKnown RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 TSPAN14Q8NG11 270 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 CNBD2Q96M20 576 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 MRPL47Q9HD33 250 aaKnown RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 CROTQ9UKG9 612 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 CDK5RAP2Q96SN8 1893 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 GOLGA8TH3BQL2 631 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 ADCY6O43306 1168 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 RBP3P10745 1247 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 CBLBQ13191 982 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 UBAP2LQ14157 1087 aaKnown RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 ZNF829Q3KNS6 432 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 LIN9Q5TKA1 542 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 TTC39BQ5VTQ0 682 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 THOC7Q6I9Y2 204 aaKnown RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 NIPAL1Q6NVV3 410 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 DNAJC14Q6Y2X3 702 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 PPM1KQ8N3J5 372 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 FBXO36Q8NEA4 188 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 CASP10Q92851 521 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 EIF2AK1Q9BQI3 630 aaKnown RBP13.5□□□□□ -0.25
VEGFA-215ENST00000497139 ADAM33Q9BZ11 813 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 CCDC68Q9H2F9 335 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 TMEM206Q9H813 350 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 THAP1Q9NVV9 213 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 RAB20Q9NX57 234 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 MTMR4Q9NYA4 1195 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms