RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 CKMP06732 381 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 CFHP08603 1231 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 SLC9A1P19634 815 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 RFX1P22670 979 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 PON1P27169 355 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 VIPR2P41587 438 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 GPC5P78333 572 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 ANO6Q4KMQ2 910 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 FKBP15Q5T1M5 1219 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 POTEHQ6S545 545 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 VITQ6UXI7 678 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 ST13P5Q8NFI4 369 aaPredicted RBP20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 KAT5Q92993 513 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 PBXIP1Q96AQ6 731 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 SMOC2Q9H3U7 446 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 TDP1Q9NUW8 608 aa20.34■□□□□ 0.85
CTDSP1-213ENST00000496785 GREB1Q4ZG55 1949 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 FAM92AA1XBS5 289 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 ZNF840PA6NDX5 716 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 FAM86C2PA6NEL3 165 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 ZNF263O14978 683 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 BEST1O76090 585 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 SETSIPP0DME0 302 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 KRT5P13647 590 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 CDK11BP21127 795 aaKnown RBP20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 PLCB2Q00722 1185 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 BST2Q10589 180 aaKnown RBP20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 GOLGA7BQ2TAP0 167 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 ARHGAP29Q52LW3 1261 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 SUGP1Q8IWZ8 645 aaKnown RBP20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 BPIFB1Q8TDL5 484 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 SHDQ96IW2 340 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 KREMEN1Q96MU8 473 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 C11orf16Q9NQ32 467 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 TAB2Q9NYJ8 693 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 TSPAN16Q9UKR8 245 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 CNTN6Q9UQ52 1028 aa20.33■□□□□ 0.85
CTDSP1-213ENST00000496785 CHADO15335 359 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 PRAMEF12O95522 483 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 ABL1P00519 1130 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 HDCP19113 662 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 FCHO2Q0JRZ9 810 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 GRM2Q14416 872 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 KRT31Q15323 416 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 AOPEPQ8N6M6 819 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 SCAMP5Q8TAC9 235 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 LRFN3Q9BTN0 628 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 PLA2G2FQ9BZM2 168 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 TRPV5Q9NQA5 729 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 ARHGEF3Q9NR81 526 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 TLR8Q9NR97 1041 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 OBSL1O75147 1896 aa20.32■□□□□ 0.84
CTDSP1-213ENST00000496785 DENND4CQ5VZ89 1909 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 BECN2A8MW95 431 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 HHLA1C9JL84 531 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 O00370 1275 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 XPO1O14980 1071 aaKnown RBP20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 MED7O43513 233 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 CAVIN2O95810 425 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 GDI1P31150 447 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 PSEN1P49768 467 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 ZNF165P49910 485 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 TUBP50607 506 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 ZNF132P52740 706 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 PRKCQQ04759 706 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 CNGA2Q16280 664 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 SNX30Q5VWJ9 437 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 LCLAT1Q6UWP7 414 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 DDX42Q86XP3 938 aaKnown RBP eCLIP20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 SIX5Q8N196 739 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 FBXL6Q8N531 539 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 LIMA1Q9UHB6 759 aaKnown RBP20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 SCML2Q9UQR0 700 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 DAAM1Q9Y4D1 1078 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 MYH10P35580 1976 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 MUC3AQ02505 3323 aa20.31■□□□□ 0.84
CTDSP1-213ENST00000496785 PATJQ8NI35 1801 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 TECTAO75443 2155 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 SYCE3A1L190 88 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 C2orf78A6NCI8 922 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 TCF3P15923 654 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 KIF11P52732 1056 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 MEA1Q16626 185 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 ARHGAP44Q17R89 818 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 HECTD3Q5T447 861 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 CC2D1AQ6P1N0 951 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 HFE2Q6ZVN8 426 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 ARHGAP18Q8N392 663 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 ARL14EPQ8N8R7 260 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 CSGALNACT1Q8TDX6 532 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 USP13Q92995 863 aaPredicted RBP20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 VPS16Q9H269 839 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 DNAJC12Q9UKB3 198 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 CA14Q9ULX7 337 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 ARHGAP26Q9UNA1 814 aa20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTDSP1-213ENST00000496785 OLFM2O95897 454 aa20.29■□□□□ 0.84
CTDSP1-213ENST00000496785 OAS1P00973 400 aaKnown RBP20.29■□□□□ 0.84
CTDSP1-213ENST00000496785 ZDHHC11BP0C7U3 371 aa20.29■□□□□ 0.84
CTDSP1-213ENST00000496785 USP8P40818 1118 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms