RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PLS3P13797 630 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 POLR2EP19388 210 aaKnown RBP9.45□□□□□ -0.9
HPS4-217ENST00000496385 CDH3P22223 829 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 ACAT1P24752 427 aaKnown RBP9.45□□□□□ -0.9
HPS4-217ENST00000496385 ALDH1A3P47895 512 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 CCR3P51677 355 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 RPS3AP61247 264 aaKnown RBP9.45□□□□□ -0.9
HPS4-217ENST00000496385 GRM1Q13255 1194 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 NCOA4Q13772 614 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 MESDQ14696 234 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 CCNG2Q16589 344 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 PEX5LQ8IYB4 626 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 ZNF713Q8N859 430 aaPredicted RBP9.45□□□□□ -0.9
HPS4-217ENST00000496385 TTC13Q8NBP0 860 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 SLC26A7Q8TE54 656 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 PSPC1Q8WXF1 523 aaKnown RBP9.45□□□□□ -0.9
HPS4-217ENST00000496385 GPATCH1Q9BRR8 931 aaKnown RBP9.45□□□□□ -0.9
HPS4-217ENST00000496385 CCDC106Q9BWC9 280 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 MRIQ9BWK5 157 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 MAK16Q9BXY0 300 aaKnown RBP9.45□□□□□ -0.9
HPS4-217ENST00000496385 TPK1Q9H3S4 243 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 QPCTLQ9NXS2 382 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 PGAP2Q9UHJ9 254 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 HERC5Q9UII4 1024 aaKnown RBP9.45□□□□□ -0.9
HPS4-217ENST00000496385 GNPTGQ9UJJ9 305 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 PSMD13Q9UNM6 376 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 RABGAP1Q9Y3P9 1069 aa9.45□□□□□ -0.9
HPS4-217ENST00000496385 H0YJX3 145 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 ALOX15BO15296 676 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 FTLP02792 175 aaPredicted RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 SERPINA6P08185 405 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 SRGAP2CP0DJJ0 459 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 SRGAP2BP0DMP2 458 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 CYP2D6P10635 497 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 CPOXP36551 454 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 ENTPD1P49961 510 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 MYBPC1Q00872 1141 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 CNGA3Q16281 694 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 BMT2Q1RMZ1 405 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 GRAMD1BQ3KR37 738 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 RARS2Q5T160 578 aaKnown RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 CST9Q5W186 159 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 SH3BP5LQ7L8J4 393 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 APOBEC3FQ8IUX4 373 aaKnown RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 TCP10LQ8TDR4 215 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 TBCKQ8TEA7 893 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 DCUN1D1Q96GG9 259 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 MKNK1Q9BUB5 465 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 INO80BQ9C086 356 aaPredicted RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 MRPL46Q9H2W6 279 aaKnown RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 DNAJC17Q9NVM6 304 aaKnown RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 CNOT11Q9UKZ1 510 aaKnown RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 B3GNT3Q9Y2A9 372 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 MGEA5O60502 916 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 DLATP10515 647 aaKnown RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 THRAP10827 490 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 RRM1P23921 792 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 CCNIQ14094 377 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 ARSHQ5FYA8 562 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 DCAF17Q5H9S7 520 aaPredicted RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 ELMSAN1Q6PJG2 1045 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 DCLRE1AQ6PJP8 1040 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 LPCAT2Q7L5N7 544 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 KBTBD6Q86V97 674 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 GSTCDQ8NEC7 633 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 ACTRT2Q8TDY3 377 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 C1orf54Q8WWF1 131 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 PYDC1Q8WXC3 89 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 PRR11Q96HE9 360 aaPredicted RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 GCNAQ96QF7 691 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 PRPF18Q99633 342 aaKnown RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 STN1Q9H668 368 aaKnown RBP9.44□□□□□ -0.9
HPS4-217ENST00000496385 ATAD3AQ9NVI7 634 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 PPME1Q9Y570 386 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 SNX9Q9Y5X1 595 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 CDK5RAP2Q96SN8 1893 aa9.44□□□□□ -0.9
HPS4-217ENST00000496385 BAZ2AQ9UIF9 1905 aaKnown RBP9.43□□□□□ -0.9
HPS4-217ENST00000496385 A0A1W2PPM1 405 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 CRTAMO95727 393 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 ATP6V1B1P15313 513 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 TSHRP16473 764 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 NAPAP54920 295 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 ZNF200P98182 395 aaPredicted RBP9.43□□□□□ -0.9
HPS4-217ENST00000496385 LRRC36Q1X8D7 754 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 KLHL38Q2WGJ6 581 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 CYP4F22Q6NT55 531 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 KCNK18Q7Z418 384 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 TTC7BQ86TV6 843 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 TERB1Q8NA31 727 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 RAB3IL1Q8TBN0 382 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 TEPSINQ96N21 525 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 CSRNP1Q96S65 589 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 DHRS4Q9BTZ2 278 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 SAYSD1Q9NPB0 183 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 BCAP29Q9UHQ4 241 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 MAD2L2Q9UI95 211 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 DNM3Q9UQ16 869 aa9.43□□□□□ -0.9
HPS4-217ENST00000496385 INPP5FQ9Y2H2 1132 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms