RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 NTHL1P78549 312 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 GFPT1Q06210 699 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-218ENST00000496197 MAPK8IP2Q13387 824 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-218ENST00000496197 RARS2Q5T160 578 aaKnown RBP14.24□□□□□ -0.13
PTPN7-218ENST00000496197 EP400NLQ6ZTU2 488 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 BHLHA9Q7RTU4 235 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 TMC8Q8IU68 726 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 FMNL3Q8IVF7 1028 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 PSMG2Q969U7 264 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 PABPC5Q96DU9 382 aaKnown RBP14.24□□□□□ -0.13
PTPN7-218ENST00000496197 PIWIL1Q96J94 861 aaKnown RBP14.24□□□□□ -0.13
PTPN7-218ENST00000496197 MSLNLQ96KJ4 702 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 SLC4A5Q9BY07 1137 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 PRKD2Q9BZL6 878 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 S1PR5Q9H228 398 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 PDCL3Q9H2J4 239 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 SFXN1Q9H9B4 322 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 NHEJ1Q9H9Q4 299 aaPredicted RBP14.24□□□□□ -0.13
PTPN7-218ENST00000496197 ZDHHC7Q9NXF8 308 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 DNMT3BQ9UBC3 853 aaKnown RBP14.24□□□□□ -0.13
PTPN7-218ENST00000496197 BRWD1Q9NSI6 2320 aa14.24□□□□□ -0.13
PTPN7-218ENST00000496197 TMCO5BA8MYB1 307 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 E5RJQ4 531 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 ZNF263O14978 683 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 TADA3O75528 432 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 LCP1P13796 627 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 TNFAIP3P21580 790 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 ANXA13P27216 316 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 CCR2P41597 374 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 KIF11P52732 1056 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 CDK17Q00537 523 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 CENPCQ03188 943 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 ADIGQ0VDE8 80 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 PTP4A2Q12974 167 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 PLD1Q13393 1074 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 CLUL1Q15846 466 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 RAD9BQ6WBX8 426 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 DENND5BQ6ZUT9 1274 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 DNAJB7Q7Z6W7 309 aaPredicted RBP14.23□□□□□ -0.13
PTPN7-218ENST00000496197 TMEM150AQ86TG1 271 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 NUP93Q8N1F7 819 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 TMEM35BQ8NCS4 154 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 KCTD13Q8WZ19 329 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 PNPLA8Q9NP80 782 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 ST7Q9NRC1 585 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 SPTLC3Q9NUV7 552 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 DZANK1Q9NVP4 752 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 IL37Q9NZH6 218 aa14.23□□□□□ -0.13
PTPN7-218ENST00000496197 MAGED2Q9UNF1 606 aaPredicted RBP14.23□□□□□ -0.13
PTPN7-218ENST00000496197 BZW2Q9Y6E2 419 aaKnown RBP14.23□□□□□ -0.13
PTPN7-218ENST00000496197 HELZP42694 1942 aaKnown RBP14.22□□□□□ -0.13
PTPN7-218ENST00000496197 SSU72P8A0A1W2PR75 194 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 SPDYE4A6NLX3 237 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 H3BQ06 376 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-218ENST00000496197 LSM8O95777 96 aaKnown RBP14.22□□□□□ -0.13
PTPN7-218ENST00000496197 TKTL1P51854 596 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 EPHB3P54753 998 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 SLC5A9Q2M3M2 681 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 CYP4A22Q5TCH4 519 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 POTEHQ6S545 545 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 GRASPQ7Z6J2 395 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-218ENST00000496197 PPP1R13BQ96KQ4 1090 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.22□□□□□ -0.13
PTPN7-218ENST00000496197 TTLL2Q9BWV7 592 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 ULBP1Q9BZM6 244 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 UBXN6Q9BZV1 441 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 IL21Q9HBE4 155 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 PRDM6Q9NQX0 595 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 ZNHIT6Q9NWK9 470 aaKnown RBP14.22□□□□□ -0.13
PTPN7-218ENST00000496197 USP3Q9Y6I4 520 aa14.22□□□□□ -0.13
PTPN7-218ENST00000496197 COL6A3P12111 3177 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.21□□□□□ -0.13
PTPN7-218ENST00000496197 FAM92AA1XBS5 289 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 PAPSS1O43252 624 aaPredicted RBP14.21□□□□□ -0.13
PTPN7-218ENST00000496197 HNRNPA1P09651 372 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTPN7-218ENST00000496197 USP17L7P0C7H9 530 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 CSH1P0DML2 217 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 CSH2P0DML3 217 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 GJA1P17302 382 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 GSDMDP57764 484 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 TSR1Q2NL82 804 aaKnown RBP14.21□□□□□ -0.13
PTPN7-218ENST00000496197 TRIM72Q6ZMU5 477 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 MMS22LQ6ZRQ5 1243 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 HFE2Q6ZVN8 426 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 GAREM2Q75VX8 874 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 MON1BQ7L1V2 547 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 PHLDB2Q86SQ0 1253 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 TMEM110Q86TL2 294 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 LRRC8AQ8IWT6 810 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 SCUBE3Q8IX30 993 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 CMASQ8NFW8 434 aaPredicted RBP14.21□□□□□ -0.13
PTPN7-218ENST00000496197 STK32AQ8WU08 396 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 SMG7Q92540 1137 aaKnown RBP14.21□□□□□ -0.13
PTPN7-218ENST00000496197 TCEAL4Q96EI5 215 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 HSFY1Q96LI6 401 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 BAG1Q99933 345 aaPredicted RBP14.21□□□□□ -0.13
PTPN7-218ENST00000496197 CORO1BQ9BR76 489 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 C11orf70Q9BRQ4 267 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 MIS12Q9H081 205 aa14.21□□□□□ -0.13
PTPN7-218ENST00000496197 NAGPAQ9UK23 515 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms