RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 STKLD1Q8NE28 680 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 RSPRY1Q96DX4 576 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 C8orf48Q96LL4 319 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 MED10Q9BTT4 135 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 SMG9Q9H0W8 520 aaKnown RBP11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 DPEP3Q9H4B8 488 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 TRPC7Q9HCX4 862 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 TDP1Q9NUW8 608 aa11.15□□□□□ -0.62
ERGIC3-219ENST00000496172 PRAMEF12O95522 483 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 HLA-DRAP01903 254 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 USP17L7P0C7H9 530 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 TRIM49P0CI25 452 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 TRIM49CP0CI26 452 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 CNR2P34972 360 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 PPP1R2P41236 205 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 PRCPP42785 496 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 RAP1GAPP47736 663 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 GCLMP48507 274 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 CCR3P51677 355 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 FKBP3Q00688 224 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 ZNF268Q14587 947 aaPredicted RBP11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 ZCWPW2Q504Y3 356 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 COBLL1Q53SF7 1204 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 ELOA2Q8IYF1 753 aaPredicted RBP11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 USP13Q92995 863 aaPredicted RBP11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 COL26A1Q96A83 441 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 B3GNT5Q9BYG0 378 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 MMRN2Q9H8L6 949 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 TMEM8AQ9HCN3 771 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 TRPM5Q9NZQ8 1165 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 NDRG2Q9UN36 371 aaKnown RBP11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 PCDHA5Q9Y5H7 936 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 SPAG17Q6Q759 2223 aa11.14□□□□□ -0.63
ERGIC3-219ENST00000496172 NCANO14594 1321 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 F8VP50 259 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 ARNTLO00327 626 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 CLDN5O00501 218 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 PSMA7O14818 248 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 GDF9O60383 454 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 RTN3O95197 1032 aaPredicted RBP11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 PAPSS2O95340 614 aaPredicted RBP11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 ASS1P00966 412 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 CKMP06732 381 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 PFKLP17858 780 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 HDCP19113 662 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 CCNE1P24864 410 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 NOP14P78316 857 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 AMPD2Q01433 879 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 LRRC63Q05C16 580 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 PPP3CAQ08209 521 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 LRRC32Q14392 662 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 ITPRIPL2Q3MIP1 535 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 C1orf220Q5T0J3 134 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 KRT39Q6A163 491 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 IL31Q6EBC2 164 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 ACOT1Q86TX2 421 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 UNC93AQ86WB7 457 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 RALGPS2Q86X27 583 aaPredicted RBP11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 NUP93Q8N1F7 819 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 SPATA20Q8TB22 786 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 SMARCD1Q96GM5 515 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 ZFYVE19Q96K21 471 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 LRRC3BQ96PB8 259 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 SLITRK1Q96PX8 696 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 ZNF518BQ9C0D4 1074 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 LMAN1LQ9HAT1 526 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 CYP3A43Q9HB55 503 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 GKN1Q9NS71 199 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 NME7Q9Y5B8 376 aa11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 GCN1Q92616 2671 aaKnown RBP11.13□□□□□ -0.63
ERGIC3-219ENST00000496172 DSPP15924 2871 aaKnown RBP11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 WDFY3Q8IZQ1 3526 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 TMEM8BA6NDV4 472 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 SPECC1L-ADORA2AF8WAN1 911 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 SLC16A3O15427 465 aaKnown RBP11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 ABL1P00519 1130 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 ASPAP45381 313 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 NDST1P52848 882 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 PDGFRLQ15198 375 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 LPAL2Q16609 132 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 WDR44Q5JSH3 913 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 ANKRD40Q6AI12 368 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 SPOPLQ6IQ16 392 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 UNQ6494/PRO21346Q6UXR6 183 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 FAM35AQ86V20 835 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 CRYBG2Q8N1P7 616 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 TTC39CQ8N584 583 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 PDZD8Q8NEN9 1154 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 TAS1R2Q8TE23 839 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 ERCC4Q92889 916 aaPredicted RBP11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 EXOC4Q96A65 974 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 ELMO3Q96BJ8 720 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 EEF2KMTQ96G04 330 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 DHTKD1Q96HY7 919 aaPredicted RBP11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 TTLL2Q9BWV7 592 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 NIF3L1Q9GZT8 377 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 SDCBP2Q9H190 292 aa11.12□□□□□ -0.63
ERGIC3-219ENST00000496172 DMAP1Q9NPF5 467 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms