RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 ARHGEF19Q8IW93 802 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 LRRC1Q9BTT6 524 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 PDE11AQ9HCR9 933 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 POLMQ9NP87 494 aaPredicted RBP9□□□□□ -0.97
VPS13B-206ENST00000496144 GDF3Q9NR23 364 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 CCDC172P0C7W6 258 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 PPP3CCP48454 512 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 AARSP49588 968 aaKnown RBP eCLIP9□□□□□ -0.97
VPS13B-206ENST00000496144 VARS2Q5ST30 1063 aaKnown RBP9□□□□□ -0.97
VPS13B-206ENST00000496144 SLFN11Q7Z7L1 901 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 COLGALT2Q8IYK4 626 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 CELF5Q8N6W0 485 aaKnown RBP9□□□□□ -0.97
VPS13B-206ENST00000496144 ZSWIM2Q8NEG5 633 aa9□□□□□ -0.97
VPS13B-206ENST00000496144 A8MXQ7 604 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 GALR2O43603 387 aaPredicted RBP8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ADH1CP00326 375 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 APODP05090 189 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ASGR2P07307 311 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 GPS2Q13227 327 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ZNF699Q32M78 642 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ALKBH5Q6P6C2 394 aaKnown RBP8.99□□□□□ -0.97
VPS13B-206ENST00000496144 HDDC3Q8N4P3 179 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 PBKQ96KB5 322 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 RBM12Q9NTZ6 932 aaKnown RBP8.99□□□□□ -0.97
VPS13B-206ENST00000496144 PRR5-ARHGAP8B1AHC4 643 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ADRB2P07550 413 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 GABRR2P28476 465 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ARHGAP8P85298 464 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 PHLDB3Q6NSJ2 640 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ADGRF2Q8IZF7 708 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 TMEM161BQ8NDZ6 487 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 DNASE1L2Q92874 299 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 CBWD1Q9BRT8 395 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 SELENOOQ9BVL4 669 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 TGM5O43548 720 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 NEBLO76041 1014 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 MYBL2P10244 700 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 NNMTP40261 264 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 RAB33AQ14088 237 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 TMEM184AQ6ZMB5 413 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 XXYLT1Q8NBI6 393 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 BSNDQ8WZ55 320 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 CALR3Q96L12 384 aaKnown RBP8.99□□□□□ -0.97
VPS13B-206ENST00000496144 KIFC3Q9BVG8 833 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 CDT1Q9H211 546 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ACBD3Q9H3P7 528 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 DNAJB4Q9UDY4 337 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 TMEM59LQ9UK28 342 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 SNX9Q9Y5X1 595 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 IGKV6-21A0A0C4DH24 114 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 FAM170BA6NMN3 283 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ANKRD63C9JTQ0 380 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 LMNAP02545 664 aaKnown RBP8.99□□□□□ -0.97
VPS13B-206ENST00000496144 TMEM253P0C7T8 217 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 HOXA9P31269 272 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 PAFAH1B1P43034 410 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 SYCE1Q8N0S2 351 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 SENP8Q96LD8 212 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ZFP42Q96MM3 310 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 CEP89Q96ST8 783 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 PACSIN2Q9UNF0 486 aaPredicted RBP8.99□□□□□ -0.97
VPS13B-206ENST00000496144 ACADMP11310 421 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 TKTP29401 623 aaKnown RBP8.99□□□□□ -0.97
VPS13B-206ENST00000496144 FOXK2Q01167 660 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 TCEAL1Q15170 157 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 SLC44A4Q53GD3 710 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 RABEPKQ7Z6M1 372 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 RTN4RL1Q86UN2 441 aaPredicted RBP8.99□□□□□ -0.97
VPS13B-206ENST00000496144 GSPT2Q8IYD1 628 aaKnown RBP8.99□□□□□ -0.97
VPS13B-206ENST00000496144 TMEM40Q8WWA1 233 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 SNX27Q96L92 541 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 PSMB7Q99436 277 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 SLC32A1Q9H598 525 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 POMKQ9H5K3 350 aa8.99□□□□□ -0.97
VPS13B-206ENST00000496144 SPTLC1O15269 473 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 B4GALT5O43286 388 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 TBX10O75333 385 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 ST8SIA6P61647 398 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 PPP3CAQ08209 521 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 CCDC15Q0P6D6 951 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 AGMOQ6ZNB7 445 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 FAM71BQ8TC56 605 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 PLEKHO2Q8TD55 490 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 ACTRT1Q8TDG2 376 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 CCDC127Q96BQ5 260 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 FZD8Q9H461 694 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 NXF1Q9UBU9 619 aaKnown RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 RPL17P18621 184 aaKnown RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 LMNB2Q03252 620 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 SLC39A4Q6P5W5 647 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 ZNF280BQ86YH2 543 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 RASGEF1CQ8N431 466 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 FAM3CQ92520 227 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 SMARCD2Q92925 531 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 LRRC4Q9HBW1 653 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 PRDM4Q9UKN5 801 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 DUSP12Q9UNI6 340 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 TELO2Q9Y4R8 837 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms