RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 ACDQ96AP0 544 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 HHIPQ96QV1 700 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 VRTNQ9H8Y1 702 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 POLR3BQ9NW08 1133 aaPredicted RBP19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 SMPD4Q9NXE4 827 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 CPQQ9Y646 472 aa19.59■□□□□ 0.73
CLCNKA-207ENST00000495784 LRRIQ3A6PVS8 624 aaPredicted RBP19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 PFKFB1P16118 471 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 YWHAQP27348 245 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 RAP1GAPP47736 663 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 CDH8P55286 799 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 ZXDBP98169 803 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 SCARA5Q6ZMJ2 495 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 SYT13Q7L8C5 426 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 SLC9A9Q8IVB4 645 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 NUP93Q8N1F7 819 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 EZH1Q92800 747 aaPredicted RBP19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 TNIP3Q96KP6 325 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 MED10Q9BTT4 135 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 RNF38Q9H0F5 515 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 TMEM30AQ9NV96 361 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 DMAC2Q9NW81 257 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 USP25Q9UHP3 1055 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 GREB1Q4ZG55 1949 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 ANAPC1Q9H1A4 1944 aa19.58■□□□□ 0.72
CLCNKA-207ENST00000495784 A0A1B0GVL5 298 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 DCDC2BA2VCK2 349 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 SLC9A3R1O14745 358 aaPredicted RBP19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 AXIN1O15169 862 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 AKAP3O75969 853 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 RTN3O95197 1032 aaPredicted RBP19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 APBB3O95704 486 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 OLFM2O95897 454 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 OAS1P00973 400 aaKnown RBP19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 C4BPAP04003 597 aaKnown RBP19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 NR3C1P04150 777 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 P4HA1P13674 534 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 CMA1P23946 247 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 CLDN10P78369 228 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 FILIP1Q7Z7B0 1213 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 KIAA1958Q8N8K9 716 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 PDZD8Q8NEN9 1154 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 LOXL4Q96JB6 756 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 CFAP97Q9P2B7 532 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 NCOR2Q9Y618 2525 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 PTPRDP23468 1912 aa19.57■□□□□ 0.72
CLCNKA-207ENST00000495784 PDXKO00764 312 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 MYL1P05976 194 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 MBL2P11226 248 aaPredicted RBP19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 DMC1Q14565 340 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 CEP135Q66GS9 1140 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 FAM35AQ86V20 835 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 KBTBD6Q86V97 674 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 DDX42Q86XP3 938 aaKnown RBP eCLIP19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 TMEM174Q8WUU8 243 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 FBXO32Q969P5 355 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 SMARCD1Q96GM5 515 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 SPATA32Q96LK8 384 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 KCNK16Q96T55 309 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 KCTD10Q9H3F6 313 aa19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 DMAP1Q9NPF5 467 aaPredicted RBP19.56■□□□□ 0.72
CLCNKA-207ENST00000495784 ATG2BQ96BY7 2078 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 SCAMP3O14828 347 aaKnown RBP19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 SLC30A4O14863 429 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 VNN1O95497 513 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 RPN1P04843 607 aaKnown RBP19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 CYP17A1P05093 508 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 OPRD1P41143 372 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 DLG4P78352 724 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 KRT85P78386 507 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 SGSM1Q2NKQ1 1148 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 C12orf50Q8NA57 414 aaPredicted RBP19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 OVCA2Q8WZ82 227 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 CCDC47Q96A33 483 aaKnown RBP19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 ELMO3Q96BJ8 720 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 ARRDC1-AS1Q9H2J1 176 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 FRMD4BQ9Y2L6 1034 aa19.55■□□□□ 0.72
CLCNKA-207ENST00000495784 CALUO43852 315 aaPredicted RBP19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 EPN2O95208 641 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 KIF20AO95235 890 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 SYKP43405 635 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 SEC13P55735 322 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 DHCR24Q15392 516 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 ZACNQ401N2 412 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 AASDHQ4L235 1098 aaPredicted RBP19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 C2orf27AQ580R0 203 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 ACOT1Q86TX2 421 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 ADGRG2Q8IZP9 1017 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 TSTD1Q8NFU3 115 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 SCAMP5Q8TAC9 235 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 TMC2Q8TDI7 906 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 SDCBP2Q9H190 292 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 KRT82Q9NSB4 513 aa19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 HELZP42694 1942 aaKnown RBP19.54■□□□□ 0.72
CLCNKA-207ENST00000495784 GDF9O60383 454 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 AP1G2O75843 785 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 ADH1CP00326 375 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 PIK3CAP42336 1068 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 SLC5A3P53794 718 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 ELF2Q15723 593 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms