RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TDRD5Q8NAT2 981 aaKnown RBP18.05■□□□□ 0.48
HDAC6-235ENST00000495515 OVCA2Q8WZ82 227 aa18.05■□□□□ 0.48
HDAC6-235ENST00000495515 BAP1Q92560 729 aa18.05■□□□□ 0.48
HDAC6-235ENST00000495515 MRPS31Q92665 395 aaKnown RBP18.05■□□□□ 0.48
HDAC6-235ENST00000495515 SECISBP2LQ93073 1101 aaKnown RBP18.05■□□□□ 0.48
HDAC6-235ENST00000495515 NOX5Q96PH1 765 aa18.05■□□□□ 0.48
HDAC6-235ENST00000495515 TTYH3Q9C0H2 523 aa18.05■□□□□ 0.48
HDAC6-235ENST00000495515 ZNF334Q9HCZ1 680 aaPredicted RBP18.05■□□□□ 0.48
HDAC6-235ENST00000495515 TRPM5Q9NZQ8 1165 aa18.05■□□□□ 0.48
HDAC6-235ENST00000495515 TCF20Q9UGU0 1960 aaKnown RBP18.04■□□□□ 0.48
HDAC6-235ENST00000495515 A0A1W2PRU2 124 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 SOBPA7XYQ1 873 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 HHLA1C9JL84 531 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 BMP1P13497 986 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 DDX6P26196 483 aaKnown RBP eCLIP18.04■□□□□ 0.48
HDAC6-235ENST00000495515 SNX16P57768 344 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 ZBED6P86452 979 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 ARID5AQ03989 594 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 SLC5A9Q2M3M2 681 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 SFMBT2Q5VUG0 894 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 ADHFE1Q8IWW8 467 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 PLCD3Q8N3E9 789 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 STKLD1Q8NE28 680 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 ITFG1Q8TB96 612 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 SHKBP1Q8TBC3 707 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 EPS8L1Q8TE68 723 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 STK32AQ8WU08 396 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 SLC35F5Q8WV83 523 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 KCTD13Q8WZ19 329 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 FBXO32Q969P5 355 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 RPGRIP1Q96KN7 1286 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 HSFY1Q96LI6 401 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 LHX5Q9H2C1 402 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 IL21Q9HBE4 155 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 GDE1Q9NZC3 331 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 IL37Q9NZH6 218 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 CDH7Q9ULB5 785 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 CAPN11Q9UMQ6 739 aa18.04■□□□□ 0.48
HDAC6-235ENST00000495515 LUC7L2Q9Y383 392 aaKnown RBP18.04■□□□□ 0.48
HDAC6-235ENST00000495515 LRRC53A6NM62 1247 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 F11P03951 625 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 GPD2P43304 727 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 ACADSBP45954 432 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 KIF11P52732 1056 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 USP46P62068 366 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 TAF10Q12962 218 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 ASIC2Q16515 512 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 DENND1BQ6P3S1 775 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 GAREM2Q75VX8 874 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 NOP9Q86U38 636 aaKnown RBP18.03■□□□□ 0.48
HDAC6-235ENST00000495515 SIX6OS1Q8N1H7 587 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 TMEM35BQ8NCS4 154 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 SCAMP5Q8TAC9 235 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 CPLX3Q8WVH0 158 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 FGF13Q92913 245 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 TCEAL4Q96EI5 215 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 MRFAP1L1Q96HT8 127 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 SLITRK6Q9H5Y7 841 aa18.03■□□□□ 0.48
HDAC6-235ENST00000495515 NCANO14594 1321 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 FAM92AA1XBS5 289 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 LSM8O95777 96 aaKnown RBP18.02■□□□□ 0.48
HDAC6-235ENST00000495515 CEBPBP17676 345 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 SSTR3P32745 418 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-235ENST00000495515 CCR2P41597 374 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 TKTL1P51854 596 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 CDR2Q01850 454 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 TEAD2Q15562 447 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 RAB41Q5JT25 222 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 TAF3Q5VWG9 929 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 TRIM72Q6ZMU5 477 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 NPAS3Q8IXF0 933 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 ING5Q8WYH8 240 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 SYN2Q92777 582 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-235ENST00000495515 CYLDQ9NQC7 956 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 TLR8Q9NR97 1041 aaKnown RBP18.02■□□□□ 0.48
HDAC6-235ENST00000495515 ST7Q9NRC1 585 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 AIPL1Q9NZN9 384 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 SCML2Q9UQR0 700 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 USP3Q9Y6I4 520 aa18.02■□□□□ 0.48
HDAC6-235ENST00000495515 TULP2O00295 520 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 MOSPD3O75425 235 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 GYPCP04921 128 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 LAMP2P13473 410 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 GJA1P17302 382 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 PFKLP17858 780 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 PSEN1P49768 467 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 RGS7P49802 495 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 ZNF75DP51815 510 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 TSR1Q2NL82 804 aaKnown RBP18.01■□□□□ 0.47
HDAC6-235ENST00000495515 GPR158Q5T848 1215 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 PMF1Q6P1K2 205 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 GPRIN1Q7Z2K8 1008 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 CCDC186Q7Z3E2 898 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 PASD1Q8IV76 773 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 ZDHHC14Q8IZN3 488 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 ARHGAP18Q8N392 663 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 MSANTD4Q8NCY6 345 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 DDX1Q92499 740 aaKnown RBP18.01■□□□□ 0.47
HDAC6-235ENST00000495515 MCRS1Q96EZ8 462 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 MYADMQ96S97 322 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms