RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 UBA3Q8TBC4 463 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 ZSCAN18Q8TBC5 510 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 OVCA2Q8WZ82 227 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 SMARCD2Q92925 531 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 TTLL2Q9BWV7 592 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 UBXN6Q9BZV1 441 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 PDCL3Q9H2J4 239 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 KCNK12Q9HB15 430 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 LRRC4Q9HBW1 653 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 ZFP14Q9HCL3 533 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 CD320Q9NPF0 282 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 NLRC4Q9NPP4 1024 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 SIK3Q9Y2K2 1263 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 GREB1Q4ZG55 1949 aa12.76□□□□□ -0.37
CSNK1E-213ENST00000495232 A0A1B0GTH6 734 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 SOBPA7XYQ1 873 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 DPYSL4O14531 572 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 TNFRSF10BO14763 440 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 TEX33O43247 280 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 CKMP06732 381 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 ASGR2P07307 311 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 KRT9P35527 623 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 PDE4CQ08493 712 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 NR1I3Q14994 352 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 STXBP5Q5T5C0 1151 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 TXNDC8Q6A555 127 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 PARM1Q6UWI2 310 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 PIGZQ86VD9 579 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 MON1AQ86VX9 555 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 TTC30AQ86WT1 665 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 ZNF606Q8WXB4 792 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 TFAP2BQ92481 460 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 E2F7Q96AV8 911 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 ZSWIM3Q96MP5 696 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 ASB16Q96NS5 453 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 NAP1L5Q96NT1 182 aaPredicted RBP12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 NAA15Q9BXJ9 866 aaKnown RBP12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 GANQ9H2C0 597 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 TLR8Q9NR97 1041 aaKnown RBP12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 CHORDC1Q9UHD1 332 aaPredicted RBP12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 MUTYHQ9UIF7 546 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 AJAP1Q9UKB5 411 aaPredicted RBP12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 SORCS3Q9UPU3 1222 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 CEP83Q9Y592 693 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 NUMBLQ9Y6R0 609 aa12.75□□□□□ -0.37
CSNK1E-213ENST00000495232 DOCK8Q8NF50 2099 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 ZNF638Q14966 1978 aaKnown RBP12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 TRAV19A0A0A6YYK7 116 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 A0A1W2PQC6 194 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 HHLA1C9JL84 531 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 ANHXE9PGG2 379 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 F8VZ95 297 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 CBFA2T2O43439 604 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 CALCAP01258 141 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 PNMA6AP0CW24 399 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 ALADP13716 330 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 STAT1P42224 750 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 PLA2G4AP47712 749 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 KIF11P52732 1056 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 TDGQ13569 410 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 HTR4Q13639 388 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 PTPN21Q16825 1174 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 FAM78AQ5JUQ0 283 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 DPY19L2P1Q6NXN4 242 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 GPRIN1Q7Z2K8 1008 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 TMEM150AQ86TG1 271 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 FMNL3Q8IVF7 1028 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 ARID3BQ8IVW6 561 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 CMTM8Q8IZV2 173 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 SIX6OS1Q8N1H7 587 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 RSAD2Q8WXG1 361 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 FGF14Q92915 247 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 ELSPBP1Q96BH3 223 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 KXD1Q9BQD3 176 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 SLC46A2Q9BY10 475 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 NACA2Q9H009 215 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 ACP6Q9NPH0 428 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 IL37Q9NZH6 218 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 SCML2Q9UQR0 700 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 MUC3AQ02505 3323 aa12.74□□□□□ -0.37
CSNK1E-213ENST00000495232 NCANO14594 1321 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 DENND4CQ5VZ89 1909 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 ZNF840PA6NDX5 716 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 DLL1O00548 723 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 NRG2O14511 850 aaPredicted RBP12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 DCXO43602 365 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 ECI2O75521 394 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 TADA3O75528 432 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 GFPT2O94808 682 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 USP17L7P0C7H9 530 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 CCDC172P0C7W6 258 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 PFKLP17858 780 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 HDCP19113 662 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 CLCN1P35523 988 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 SOX5P35711 763 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 PSEN1P49768 467 aa12.73□□□□□ -0.37
CSNK1E-213ENST00000495232 TKTL1P51854 596 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms