RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 FITM2Q8N6M3 262 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 LINC01465Q8N7H1 131 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 DENND1AQ8TEH3 1009 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PPP1R13LQ8WUF5 828 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 C16orf70Q9BSU1 422 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 CNPY3Q9BT09 278 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 TUT1Q9H6E5 874 aaKnown RBP11.72□□□□□ -0.53
CHMP3-209ENST00000494623 KLHL14Q9P2G3 628 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PSMC3IPQ9P2W1 217 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PRKAG3Q9UGI9 489 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 SLC24A2Q9UI40 661 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 ITGA11Q9UKX5 1188 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PNMA3Q9UL41 463 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 C2CD4BA6NLJ0 364 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 H7C0C1 242 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PRPSAP2O60256 369 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 KRT4P19013 534 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PCK1P35558 622 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 ATP5OP48047 213 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 ELF3P78545 371 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-209ENST00000494623 KRT81Q14533 505 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 SLC1A5Q15758 541 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 SNCBQ16143 134 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 GOLGA7BQ2TAP0 167 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 ZNF792Q3KQV3 632 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 ACOT1Q86TX2 421 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PDIK1LQ8N165 341 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 ATP11CQ8NB49 1132 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PPTC7Q8NI37 304 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.72□□□□□ -0.53
CHMP3-209ENST00000494623 RMDN2Q96LZ7 410 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 ECT2Q9H8V3 914 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 GPATCH2LQ9NWQ4 482 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 GRID1Q9ULK0 1009 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 SNX9Q9Y5X1 595 aa11.72□□□□□ -0.53
CHMP3-209ENST00000494623 PCNTO95613 3336 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 A0A1B0GUA9 196 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 PRPF4O43172 522 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHMP3-209ENST00000494623 MAP3K6O95382 1288 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 PFKMP08237 780 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 ROR1Q01973 937 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 SNAPC2Q13487 334 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 KIZQ2M2Z5 673 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 PPP1R26Q5T8A7 1209 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-209ENST00000494623 PMF1Q6P1K2 205 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 PNMA8AQ86V59 439 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-209ENST00000494623 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 SHCBP1Q8NEM2 672 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 LRRN4Q8WUT4 740 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 SLC10A4Q96EP9 437 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 KLF6Q99612 283 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-209ENST00000494623 MRPL45Q9BRJ2 306 aaKnown RBP11.71□□□□□ -0.53
CHMP3-209ENST00000494623 WDR83Q9BRX9 315 aaKnown RBP11.71□□□□□ -0.53
CHMP3-209ENST00000494623 SLCO1B3Q9NPD5 702 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 NGRNQ9NPE2 291 aaKnown RBP11.71□□□□□ -0.53
CHMP3-209ENST00000494623 FAM49BQ9NUQ9 324 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 ZMYND8Q9ULU4 1186 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-209ENST00000494623 SMG5Q9UPR3 1016 aaKnown RBP11.71□□□□□ -0.53
CHMP3-209ENST00000494623 CHMP2BQ9UQN3 213 aa11.71□□□□□ -0.53
CHMP3-209ENST00000494623 GOLGA8RI6L899 631 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 PPEF2O14830 753 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 NPTXRO95502 500 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 MSH2P43246 934 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 MGAT5Q09328 741 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 INCA1Q0VD86 236 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 GRIK4Q16099 956 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 KYAT1Q16773 422 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 GALNTL6Q49A17 601 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 CCDC14Q49A88 953 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 ZC3H12AQ5D1E8 599 aaKnown RBP11.71□□□□□ -0.54
CHMP3-209ENST00000494623 EFHC2Q5JST6 749 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 HHATQ5VTY9 493 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 LPIN3Q9BQK8 851 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.71□□□□□ -0.54
CHMP3-209ENST00000494623 SNTG2Q9NY99 539 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 SENP1Q9P0U3 644 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 PHTF1Q9UMS5 762 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 C2CD2Q9Y426 696 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 HEY1Q9Y5J3 304 aa11.71□□□□□ -0.54
CHMP3-209ENST00000494623 WDR91A4D1P6 747 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-209ENST00000494623 GBP2P32456 591 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-209ENST00000494623 CYP4V2Q6ZWL3 525 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-209ENST00000494623 ECHDC2Q86YB7 292 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 IGDCC3Q8IVU1 814 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 LRRC8CQ8TDW0 803 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 GRAMD1AQ96CP6 724 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 PAFAH2Q99487 392 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 MIS12Q9H081 205 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 GBA2Q9HCG7 927 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-209ENST00000494623 VTA1Q9NP79 307 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 KIAA1257Q9ULG3 409 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 CHUKO15111 745 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 AVILO75366 819 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 ENDOD1O94919 500 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 STIP1P31948 543 aaKnown RBP11.7□□□□□ -0.54
CHMP3-209ENST00000494623 ELK3P41970 407 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 NCALDP61601 193 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms