RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 C18orf8Q96DM3 657 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 MOGAT1Q96PD6 335 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 PPP1R9BQ96SB3 815 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 MESP1Q9BRJ9 268 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 UNKLQ9H9P5 680 aaKnown RBP5.31□□□□□ -1.56
SMC4-224ENST00000494612 SERHLQ9NQF3 203 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 TRMT13Q9NUP7 481 aaKnown RBP5.31□□□□□ -1.56
SMC4-224ENST00000494612 TBCCD1Q9NVR7 557 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 MYO1AQ9UBC5 1043 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 SERTAD3Q9UJW9 196 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 MAGED2Q9UNF1 606 aaPredicted RBP5.31□□□□□ -1.56
SMC4-224ENST00000494612 SHOC2Q9UQ13 582 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 RIPOR2Q9Y4F9 1068 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 ABCC9O60706 1549 aa5.31□□□□□ -1.56
SMC4-224ENST00000494612 TRGV11A0A075B6L2 103 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 A0A0B4J269 797 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 LOC102723971A0A1B0GUV8 181 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 A0A1W2PPC4 97 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 XRCC6P12956 609 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMC4-224ENST00000494612 TPH1P17752 444 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 EEF1GP26641 437 aaKnown RBP5.3□□□□□ -1.56
SMC4-224ENST00000494612 ACVR2AP27037 513 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 CD6P30203 668 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 TECP42680 631 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 BTKQ06187 659 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 MAPK7Q13164 816 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 TUBB3Q13509 450 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 ARHGEF7Q14155 803 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 STARD3Q14849 445 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 ELF2Q15723 593 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 MPEG1Q2M385 716 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 MGAT5BQ3V5L5 792 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 KRTAP5-11Q6L8G4 156 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 RGS7BPQ6MZT1 257 aaPredicted RBP5.3□□□□□ -1.56
SMC4-224ENST00000494612 USP49Q70CQ1 688 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 ARHGEF25Q86VW2 580 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 MYLK4Q86YV6 388 aaPredicted RBP5.3□□□□□ -1.56
SMC4-224ENST00000494612 ENAHQ8N8S7 591 aaPredicted RBP5.3□□□□□ -1.56
SMC4-224ENST00000494612 BPIFB1Q8TDL5 484 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 BRI3BPQ8WY22 251 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 AIFM2Q9BRQ8 373 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 SLC29A3Q9BZD2 475 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 WDR12Q9GZL7 423 aaKnown RBP5.3□□□□□ -1.56
SMC4-224ENST00000494612 GBA2Q9HCG7 927 aaPredicted RBP5.3□□□□□ -1.56
SMC4-224ENST00000494612 CASS4Q9NQ75 786 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 PADI4Q9UM07 663 aa5.3□□□□□ -1.56
SMC4-224ENST00000494612 A0A1W2PS29 197 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 PPM1DO15297 605 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 CYP2C9P11712 490 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 ADORA2AP29274 412 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 HNRNPMP52272 730 aaKnown RBP eCLIP5.29□□□□□ -1.56
SMC4-224ENST00000494612 VAV2P52735 878 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 WNT3P56703 355 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 LOXL3P58215 753 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 MRPS35P82673 323 aaKnown RBP5.29□□□□□ -1.56
SMC4-224ENST00000494612 SATB1Q01826 763 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 MYO1EQ12965 1108 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 EIF2B5Q13144 721 aaKnown RBP5.29□□□□□ -1.56
SMC4-224ENST00000494612 FAM83BQ5T0W9 1011 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 GORABQ5T7V8 394 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 DEPDC1Q5TB30 811 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 FBXO38Q6PIJ6 1188 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 BEND5Q7L4P6 421 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 COLGALT2Q8IYK4 626 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 SDR16C5Q8N3Y7 309 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 LNX2Q8N448 690 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 CCDC150Q8NCX0 1101 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 DNAJB14Q8TBM8 379 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 IPCEF1Q8WWN9 437 aaPredicted RBP5.29□□□□□ -1.56
SMC4-224ENST00000494612 MUL1Q969V5 352 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 PTCD3Q96EY7 689 aaKnown RBP5.29□□□□□ -1.56
SMC4-224ENST00000494612 TPSD1Q9BZJ3 242 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 KLK15Q9H2R5 256 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 CXorf36Q9H7Y0 433 aa5.29□□□□□ -1.56
SMC4-224ENST00000494612 NDRG4Q9ULP0 352 aaKnown RBP5.29□□□□□ -1.56
SMC4-224ENST00000494612 FAM234BA2RU67 622 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 DNAJC9-AS1A6NH13 148 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 CGB1A6NKQ9 187 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 E7ENX8 843 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 TRIAP1O43715 76 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 NBNO60934 754 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 SRGAP2O75044 1071 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 PIAS2O75928 621 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 A1BGP04217 495 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 PPP3CBP16298 524 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 LRPAP1P30533 357 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 CPT1AP50416 773 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 DGKEP52429 567 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 TAP2Q03519 686 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 E2F2Q14209 437 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 SF3B3Q15393 1217 aaKnown RBP5.28□□□□□ -1.56
SMC4-224ENST00000494612 NPY5RQ15761 445 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 INSCQ1MX18 579 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 GRAMD1BQ3KR37 738 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 TUBB8Q3ZCM7 444 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 DGKKQ5KSL6 1271 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 ANO1Q5XXA6 986 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 PLAG1Q6DJT9 500 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 FCRL6Q6DN72 434 aa5.28□□□□□ -1.56
SMC4-224ENST00000494612 CRTC1Q6UUV9 634 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms