RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CHRDQ9H2X0 955 aa35.23■■■■□ 3.23
CBX4-203ENST00000494546 RAB20Q9NX57 234 aa35.23■■■■□ 3.23
CBX4-203ENST00000494546 R4GN57 208 aa35.23■■■■□ 3.23
CBX4-203ENST00000494546 BIN1O00499 593 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 CHRNB1P11230 501 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 ARSAP15289 507 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 ADORA2BP29275 332 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 PPP1R2P41236 205 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 CSTF1Q05048 431 aaKnown RBP35.22■■■■□ 3.23
CBX4-203ENST00000494546 USP4Q13107 963 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 PON2Q15165 354 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 FBXO32Q969P5 355 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 ARMCX3Q9UH62 379 aaPredicted RBP35.22■■■■□ 3.23
CBX4-203ENST00000494546 ARHGAP26Q9UNA1 814 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 ANAPC1Q9H1A4 1944 aa35.22■■■■□ 3.23
CBX4-203ENST00000494546 PFKLP17858 780 aa35.21■■■■□ 3.23
CBX4-203ENST00000494546 SLC5A3P53794 718 aa35.21■■■■□ 3.23
CBX4-203ENST00000494546 PDGFRLQ15198 375 aa35.21■■■■□ 3.23
CBX4-203ENST00000494546 WDR44Q5JSH3 913 aa35.21■■■■□ 3.23
CBX4-203ENST00000494546 ASCL5Q7RTU5 278 aa35.21■■■■□ 3.23
CBX4-203ENST00000494546 SCAMP5Q8TAC9 235 aa35.21■■■■□ 3.23
CBX4-203ENST00000494546 SMOQ99835 787 aa35.21■■■■□ 3.23
CBX4-203ENST00000494546 RBM12Q9NTZ6 932 aaKnown RBP35.21■■■■□ 3.23
CBX4-203ENST00000494546 FBXO4Q9UKT5 387 aa35.21■■■■□ 3.23
CBX4-203ENST00000494546 KIF26AQ9ULI4 1882 aaPredicted RBP35.2■■■■□ 3.23
CBX4-203ENST00000494546 BEST1O76090 585 aa35.2■■■■□ 3.23
CBX4-203ENST00000494546 MAP3K7CLP57077 242 aa35.2■■■■□ 3.23
CBX4-203ENST00000494546 LRRC32Q14392 662 aa35.2■■■■□ 3.23
CBX4-203ENST00000494546 CBWD6Q4V339 395 aa35.2■■■■□ 3.23
CBX4-203ENST00000494546 CBWD3Q5JTY5 395 aa35.2■■■■□ 3.23
CBX4-203ENST00000494546 CBWD5Q5RIA9 395 aa35.2■■■■□ 3.23
CBX4-203ENST00000494546 DUS2Q9NX74 493 aaKnown RBP35.2■■■■□ 3.23
CBX4-203ENST00000494546 WNT6Q9Y6F9 365 aa35.2■■■■□ 3.23
CBX4-203ENST00000494546 CACNA1IQ9P0X4 2223 aa35.2■■■■□ 3.22
CBX4-203ENST00000494546 OTOL1A6NHN0 477 aaPredicted RBP35.19■■■■□ 3.22
CBX4-203ENST00000494546 TNFRSF10BO14763 440 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 CILPO75339 1184 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 BMP6P22004 513 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 IFNAR2P48551 515 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 MORC3Q14149 939 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 PDZD8Q8NEN9 1154 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 ZMIZ2Q8NF64 920 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 PATJQ8NI35 1801 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 WHAMMQ8TF30 809 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 OSCP1Q8WVF1 389 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 CYFIP2Q96F07 1278 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 DNAI2Q9GZS0 605 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 RNF38Q9H0F5 515 aa35.19■■■■□ 3.22
CBX4-203ENST00000494546 PRR23AA6NEV1 266 aa35.18■■■■□ 3.22
CBX4-203ENST00000494546 FAM200BP0CF97 657 aa35.18■■■■□ 3.22
CBX4-203ENST00000494546 UBE2HP62256 183 aa35.18■■■■□ 3.22
CBX4-203ENST00000494546 ZNF394Q53GI3 561 aa35.18■■■■□ 3.22
CBX4-203ENST00000494546 ZC3H14Q6PJT7 736 aaKnown RBP35.18■■■■□ 3.22
CBX4-203ENST00000494546 NELFBQ8WX92 580 aa35.18■■■■□ 3.22
CBX4-203ENST00000494546 HNRNPABQ99729 332 aaKnown RBP35.18■■■■□ 3.22
CBX4-203ENST00000494546 CHORDC1Q9UHD1 332 aaPredicted RBP35.18■■■■□ 3.22
CBX4-203ENST00000494546 CTNND2Q9UQB3 1225 aa35.18■■■■□ 3.22
CBX4-203ENST00000494546 PPP1R3GB7ZBB8 358 aa35.17■■■■□ 3.22
CBX4-203ENST00000494546 OAS1P00973 400 aaKnown RBP35.17■■■■□ 3.22
CBX4-203ENST00000494546 ZNF528Q3MIS6 628 aa35.17■■■■□ 3.22
CBX4-203ENST00000494546 TSSK4Q6SA08 328 aa35.17■■■■□ 3.22
CBX4-203ENST00000494546 CPA6Q8N4T0 437 aa35.17■■■■□ 3.22
CBX4-203ENST00000494546 OVCA2Q8WZ82 227 aa35.17■■■■□ 3.22
CBX4-203ENST00000494546 TATDN2Q93075 761 aa35.17■■■■□ 3.22
CBX4-203ENST00000494546 IER2Q9BTL4 223 aa35.17■■■■□ 3.22
CBX4-203ENST00000494546 METTL14Q9HCE5 456 aaKnown RBP35.17■■■■□ 3.22
CBX4-203ENST00000494546 CSNK1G1Q9HCP0 422 aa35.17■■■■□ 3.22
CBX4-203ENST00000494546 SMPD4Q9NXE4 827 aa35.17■■■■□ 3.22
CBX4-203ENST00000494546 LEFTY2O00292 366 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 TCF3P15923 654 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 ANP32AP39687 249 aaKnown RBP35.16■■■■□ 3.22
CBX4-203ENST00000494546 SLC7A9P82251 487 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 ZXDBP98169 803 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 CCDC40Q4G0X9 1142 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 DGKKQ5KSL6 1271 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 SLC35C1Q96A29 364 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 JAKMIP2Q96AA8 810 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 FAXDC2Q96IV6 333 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 CEP63Q96MT8 703 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 ARID3AQ99856 593 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 DUSP9Q99956 384 aaKnown RBP35.16■■■■□ 3.22
CBX4-203ENST00000494546 PRMT8Q9NR22 394 aaPredicted RBP35.16■■■■□ 3.22
CBX4-203ENST00000494546 COMMD8Q9NX08 183 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 IL37Q9NZH6 218 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 CPQQ9Y646 472 aa35.16■■■■□ 3.22
CBX4-203ENST00000494546 OLFM2O95897 454 aa35.15■■■■□ 3.22
CBX4-203ENST00000494546 TTI2Q6NXR4 508 aa35.15■■■■□ 3.22
CBX4-203ENST00000494546 FILIP1Q7Z7B0 1213 aa35.15■■■■□ 3.22
CBX4-203ENST00000494546 ECT2Q9H8V3 914 aa35.15■■■■□ 3.22
CBX4-203ENST00000494546 CISHQ9NSE2 258 aa35.15■■■■□ 3.22
CBX4-203ENST00000494546 GMIPQ9P107 970 aa35.15■■■■□ 3.22
CBX4-203ENST00000494546 BICDL2A1A5D9 508 aa35.14■■■■□ 3.22
CBX4-203ENST00000494546 MBL2P11226 248 aaPredicted RBP35.14■■■■□ 3.22
CBX4-203ENST00000494546 AMPD2Q01433 879 aa35.14■■■■□ 3.22
CBX4-203ENST00000494546 GAS6Q14393 721 aa35.14■■■■□ 3.22
CBX4-203ENST00000494546 CAMK4Q16566 473 aa35.14■■■■□ 3.22
CBX4-203ENST00000494546 EML3Q32P44 896 aa35.14■■■■□ 3.22
CBX4-203ENST00000494546 CLEC20AQ6ZU45 233 aa35.14■■■■□ 3.22
CBX4-203ENST00000494546 TTC39CQ8N584 583 aa35.14■■■■□ 3.22
CBX4-203ENST00000494546 ATP2A3Q93084 1043 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms