RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PPP3CCP48454 512 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 FKBP3Q00688 224 aaKnown RBP14□□□□□ -0.17
ERCC3-209ENST00000494464 MYL5Q02045 173 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 STIM1Q13586 685 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 NCAPHQ15003 741 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 FOXR2Q6PJQ5 311 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 ZSCAN30Q86W11 494 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 GPIHBP1Q8IV16 184 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 FUKQ8N0W3 1084 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 CRYBG2Q8N1P7 616 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 CCDC150Q8NCX0 1101 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 ZFYVE19Q96K21 471 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 FAM83CQ9BQN1 747 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 CHRDQ9H2X0 955 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 APOBEC3GQ9HC16 384 aaKnown RBP14□□□□□ -0.17
ERCC3-209ENST00000494464 TRPC7Q9HCX4 862 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 DMAP1Q9NPF5 467 aaPredicted RBP14□□□□□ -0.17
ERCC3-209ENST00000494464 TRPM5Q9NZQ8 1165 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 GCNT4Q9P109 453 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 HMGXB4Q9UGU5 601 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 FBXO4Q9UKT5 387 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 NDRG2Q9UN36 371 aaKnown RBP14□□□□□ -0.17
ERCC3-209ENST00000494464 VPS13AQ96RL7 3174 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 F5P12259 2224 aa14□□□□□ -0.17
ERCC3-209ENST00000494464 GOLGA6L6A8MZA4 724 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 SPECC1L-ADORA2AF8WAN1 911 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 CLDN5O00501 218 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 PSMA7O14818 248 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 RTN3O95197 1032 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-209ENST00000494464 PTMAP06454 111 aaKnown RBP13.99□□□□□ -0.17
ERCC3-209ENST00000494464 TRIM21P19474 475 aaKnown RBP13.99□□□□□ -0.17
ERCC3-209ENST00000494464 BMP6P22004 513 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 CCNE1P24864 410 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 KPNA1P52294 538 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-209ENST00000494464 NDST1P52848 882 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 PMS1P54277 932 aaKnown RBP13.99□□□□□ -0.17
ERCC3-209ENST00000494464 ZNF77Q15935 545 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 ITPRIPL2Q3MIP1 535 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 PAQR9Q6ZVX9 377 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 ACOT1Q86TX2 421 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 MAML2Q8IZL2 1156 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-209ENST00000494464 NUP93Q8N1F7 819 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 FBXL13Q8NEE6 735 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 RIN3Q8TB24 985 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 OVCA2Q8WZ82 227 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 EEF2KMTQ96G04 330 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 DHTKD1Q96HY7 919 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-209ENST00000494464 SLITRK1Q96PX8 696 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 SLC22A12Q96S37 553 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 FAM124BQ9H5Z6 455 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-209ENST00000494464 MMRN2Q9H8L6 949 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 KRT82Q9NSB4 513 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 SPATA6Q9NWH7 488 aaPredicted RBP13.99□□□□□ -0.17
ERCC3-209ENST00000494464 GTSE1Q9NYZ3 720 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 ARHGAP26Q9UNA1 814 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 MYO16Q9Y6X6 1858 aa13.99□□□□□ -0.17
ERCC3-209ENST00000494464 C2orf78A6NCI8 922 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 TRIM49BA6NDI0 452 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 ZNF840PA6NDX5 716 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 LAMTOR5O43504 91 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 OLFM2O95897 454 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 SP9P0CG40 484 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 ERCC5P28715 1186 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-209ENST00000494464 SOX9P48436 509 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 TNK2Q07912 1038 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 MTF1Q14872 753 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 ZNF528Q3MIS6 628 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 ANKRD40Q6AI12 368 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 ZC3H14Q6PJT7 736 aaKnown RBP13.98□□□□□ -0.17
ERCC3-209ENST00000494464 MAMSTRQ6ZN01 415 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 FRMD5Q7Z6J6 570 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 KIAA1958Q8N8K9 716 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 ARL14EPQ8N8R7 260 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-209ENST00000494464 PDZD8Q8NEN9 1154 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 MED10Q9BTT4 135 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 TRIM5Q9C035 493 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 CSNK1G1Q9HCP0 422 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 HPS4Q9NQG7 708 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 PRMT8Q9NR22 394 aaPredicted RBP13.98□□□□□ -0.17
ERCC3-209ENST00000494464 GKN1Q9NS71 199 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 COMMD8Q9NX08 183 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 IL37Q9NZH6 218 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 MYH10P35580 1976 aa13.98□□□□□ -0.17
ERCC3-209ENST00000494464 DMDP11532 3685 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 CACNA1IQ9P0X4 2223 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 FAM92AA1XBS5 289 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 PRR23AA6NEV1 266 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 TNFRSF10BO14763 440 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 GFRA3O60609 400 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 CILPO75339 1184 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 OAS1P00973 400 aaKnown RBP13.97□□□□□ -0.17
ERCC3-209ENST00000494464 CHRNB1P11230 501 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 CCDC130P13994 396 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
ERCC3-209ENST00000494464 HDCP19113 662 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 SLC5A3P53794 718 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 SLC7A9P82251 487 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 TAF10Q12962 218 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 ORC1Q13415 861 aa13.97□□□□□ -0.17
ERCC3-209ENST00000494464 RUNX3Q13761 415 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms