RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 VPS53Q5VIR6 699 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 CACHD1Q5VU97 1274 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 KIAA0895LQ68EN5 471 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 USP17L6PQ6QN14 398 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 MORC1Q86VD1 984 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 TTC30AQ86WT1 665 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 CCDC33Q8N5R6 958 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 SIRT6Q8N6T7 355 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 ENAHQ8N8S7 591 aaPredicted RBP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 ABHD11Q8NFV4 315 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 OR56A3Q8NH54 315 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 TFAP2BQ92481 460 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 LPIN2Q92539 896 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 SARAFQ96BY9 339 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 EVI5LQ96CN4 794 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 RSPRY1Q96DX4 576 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 IQCDQ96DY2 449 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 VPS50Q96JG6 964 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 TNIP3Q96KP6 325 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 SNX22Q96L94 193 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 TBCBQ99426 244 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 TIMP4Q99727 224 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 BRIP1Q9BX63 1249 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 NAA15Q9BXJ9 866 aaKnown RBP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 INO80BQ9C086 356 aaPredicted RBP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 AMBRA1Q9C0C7 1298 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 CPNE5Q9HCH3 593 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 ZNF212Q9UDV6 495 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 RGS17Q9UGC6 210 aaPredicted RBP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 ITGB1BP2Q9UKP3 347 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 NDRG4Q9ULP0 352 aaKnown RBP2.84□□□□□ -1.95
LMNB1-207ENST00000494185 PADI4Q9UM07 663 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 PHTF1Q9UMS5 762 aa2.84□□□□□ -1.95
LMNB1-207ENST00000494185 CCDC189A1A4V9 331 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 POM121BA6NF01 834 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 F8W8V4 182 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 KIAA0355O15063 1070 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 TMPRSS11DO60235 418 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 USP1O94782 785 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 MT-ND5P03915 603 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 ANXA2P07355 339 aaKnown RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 FAM163BP0C2L3 166 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 NR2F6P10588 404 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 TXNP10599 105 aaKnown RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 PAX3P23760 479 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 ACVR2AP27037 513 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 ADRA1BP35368 520 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 STT3AP46977 705 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 TM4SF4P48230 202 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 CARSP49589 748 aaKnown RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 PRIM2P49643 509 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 DGKEP52429 567 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 MAPK10P53779 464 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 EEFSECP57772 596 aaKnown RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 SIM1P81133 766 aaPredicted RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 POU5F1BQ06416 359 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 ZNF543Q08ER8 600 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 MYO1EQ12965 1108 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 EIF2B5Q13144 721 aaKnown RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 GRM1Q13255 1194 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 ARHGEF7Q14155 803 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 INO80DQ53TQ3 878 aaPredicted RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 FAM83BQ5T0W9 1011 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 TSTD2Q5T7W7 516 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 ERAP2Q6P179 960 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 TMED8Q6PL24 325 aaPredicted RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 UNC13DQ70J99 1090 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 RNF44Q7L0R7 432 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 PARS2Q7L3T8 475 aaKnown RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 DPP9Q86TI2 863 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 KRT73Q86Y46 540 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 ZNF280BQ86YH2 543 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 LIX1LQ8IVB5 337 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 FAM109AQ8N4B1 249 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 BOLLQ8N9W6 283 aaKnown RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 FANCBQ8NB91 859 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 SIMC1Q8NDZ2 872 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 ACRBPQ8NEB7 543 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 BPIFB1Q8TDL5 484 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 PARD3BQ8TEW8 1205 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 XAGE5Q8WWM1 108 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 DAZAP1Q96EP5 407 aaKnown RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 PDLIM2Q96JY6 352 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 FYTTD1Q96QD9 318 aaKnown RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 MYD88Q99836 296 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 SELENOOQ9BVL4 669 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 SEMA4CQ9C0C4 833 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 HEYLQ9NQ87 328 aaPredicted RBP2.83□□□□□ -1.96
LMNB1-207ENST00000494185 XPNPEP3Q9NQH7 507 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 STARD7Q9NQZ5 370 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 MID2Q9UJV3 735 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 SERTAD3Q9UJW9 196 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 CEP83Q9Y592 693 aa2.83□□□□□ -1.96
LMNB1-207ENST00000494185 RASA4BC9J798 803 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 H7C4K7 107 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 hCG_1984214I3L0E3 225 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 RAB27BO00194 218 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 RASA4O43374 803 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 SH3BP5O60239 455 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms