RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 NUP62CLQ9H1M0 184 aa15.58■□□□□ 0.08
ATG4B-224ENST00000494132 EBF3Q9H4W6 596 aa15.58■□□□□ 0.08
ATG4B-224ENST00000494132 GKN1Q9NS71 199 aa15.58■□□□□ 0.08
ATG4B-224ENST00000494132 CHORDC1Q9UHD1 332 aaPredicted RBP15.58■□□□□ 0.08
ATG4B-224ENST00000494132 COQ4Q9Y3A0 265 aa15.58■□□□□ 0.08
ATG4B-224ENST00000494132 TNFRSF10BO14763 440 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 USP17L7P0C7H9 530 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 FAM200BP0CF97 657 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 ARSAP15289 507 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 ZXDBP98169 803 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 CUL2Q13617 745 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 ANGPT1Q15389 498 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 TXNDC11Q6PKC3 985 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 ZNF852Q6ZMS4 543 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 CLEC17AQ6ZS10 378 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 CLEC20AQ6ZU45 233 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 SH3RF2Q8TEC5 729 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 FAM3CQ92520 227 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 ATOH1Q92858 354 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-224ENST00000494132 HEXIM2Q96MH2 286 aaKnown RBP15.57■□□□□ 0.08
ATG4B-224ENST00000494132 IPO9Q96P70 1041 aaKnown RBP15.57■□□□□ 0.08
ATG4B-224ENST00000494132 SLITRK1Q96PX8 696 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 HNRNPABQ99729 332 aaKnown RBP15.57■□□□□ 0.08
ATG4B-224ENST00000494132 RNF38Q9H0F5 515 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 HPS4Q9NQG7 708 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 SMPD4Q9NXE4 827 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 GMIPQ9P107 970 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 ZMYM5Q9UJ78 669 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 WNT6Q9Y6F9 365 aa15.57■□□□□ 0.08
ATG4B-224ENST00000494132 OTOL1A6NHN0 477 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-224ENST00000494132 RTN3O95197 1032 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-224ENST00000494132 TRIM21P19474 475 aaKnown RBP15.56■□□□□ 0.08
ATG4B-224ENST00000494132 PGFP49763 221 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 RAD23BP54727 409 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 USP4Q13107 963 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 MTF1Q14872 753 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 ZNF77Q15935 545 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 DPCR1Q3MIW9 517 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 CC2D1AQ6P1N0 951 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-224ENST00000494132 TRIM59Q8IWR1 403 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 SLC4A11Q8NBS3 891 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 KAT5Q92993 513 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 CNOT6LQ96LI5 555 aaKnown RBP15.56■□□□□ 0.08
ATG4B-224ENST00000494132 CEP295NLQ96MC4 621 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 KIF9Q9HAQ2 790 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 TRPV5Q9NQA5 729 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 THG1LQ9NWX6 298 aaKnown RBP15.56■□□□□ 0.08
ATG4B-224ENST00000494132 EHD2Q9NZN4 543 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 RWDD2AQ9UIY3 292 aa15.56■□□□□ 0.08
ATG4B-224ENST00000494132 KIAA1549LQ6ZVL6 1849 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 SOBPA7XYQ1 873 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 SPECC1L-ADORA2AF8WAN1 911 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 OAS1P00973 400 aaKnown RBP15.55■□□□□ 0.08
ATG4B-224ENST00000494132 CALCAP01258 141 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 MBL2P11226 248 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-224ENST00000494132 CTHP32929 405 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 NUBP1P53384 320 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 KCNH2Q12809 1159 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 FZD5Q13467 585 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 ZNF268Q14587 947 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-224ENST00000494132 PON2Q15165 354 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 FOXR2Q6PJQ5 311 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 ARHGEF19Q8IW93 802 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 GPT2Q8TD30 523 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 TMEM176AQ96HP8 235 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 NT5C1BQ96P26 610 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 GBP4Q96PP9 640 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 FAM83CQ9BQN1 747 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 CCSER2Q9H7U1 834 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 CSNK1G1Q9HCP0 422 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 RBM12Q9NTZ6 932 aaKnown RBP15.55■□□□□ 0.08
ATG4B-224ENST00000494132 SPATA6Q9NWH7 488 aaPredicted RBP15.55■□□□□ 0.08
ATG4B-224ENST00000494132 CPQQ9Y646 472 aa15.55■□□□□ 0.08
ATG4B-224ENST00000494132 HHLA1C9JL84 531 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 MAN2B1O00754 1011 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 CYP26A1O43174 497 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 AFPP02771 609 aaKnown RBP15.54■□□□□ 0.08
ATG4B-224ENST00000494132 CCDC192P0DO97 292 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 CD19P15391 556 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 ACO1P21399 889 aaKnown RBP15.54■□□□□ 0.08
ATG4B-224ENST00000494132 IFNAR2P48551 515 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 PLCB2Q00722 1185 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 RUNX3Q13761 415 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 ITPRIPL2Q3MIP1 535 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 HSP90AA4PQ58FG1 418 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 NAIF1Q69YI7 327 aaPredicted RBP15.54■□□□□ 0.08
ATG4B-224ENST00000494132 RRAGAQ7L523 313 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 ALYREFQ86V81 257 aaKnown RBP15.54■□□□□ 0.08
ATG4B-224ENST00000494132 PPM1KQ8N3J5 372 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 UBR7Q8N806 425 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 LMO3Q8TAP4 145 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 DUSP16Q9BY84 665 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 DUS2Q9NX74 493 aaKnown RBP15.54■□□□□ 0.08
ATG4B-224ENST00000494132 ARHGAP26Q9UNA1 814 aa15.54■□□□□ 0.08
ATG4B-224ENST00000494132 MRPS17Q9Y2R5 130 aaKnown RBP15.54■□□□□ 0.08
ATG4B-224ENST00000494132 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.54■□□□□ 0.08
ATG4B-224ENST00000494132 LEFTY2O00292 366 aa15.53■□□□□ 0.08
ATG4B-224ENST00000494132 COCHO43405 550 aa15.53■□□□□ 0.08
ATG4B-224ENST00000494132 GNA14O95837 355 aa15.53■□□□□ 0.08
ATG4B-224ENST00000494132 OLFM2O95897 454 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms