RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 LRRC37A2A6NM11 1700 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 LCTP09848 1927 aa12□□□□□ -0.49
RFC4-214ENST00000494047 SPDYE16A6NNV3 312 aaPredicted RBP12□□□□□ -0.49
RFC4-214ENST00000494047 TNPO2O14787 897 aaKnown RBP12□□□□□ -0.49
RFC4-214ENST00000494047 FAM189A1O60320 539 aa12□□□□□ -0.49
RFC4-214ENST00000494047 ECM2O94769 699 aaPredicted RBP12□□□□□ -0.49
RFC4-214ENST00000494047 MCF2P10911 925 aa12□□□□□ -0.49
RFC4-214ENST00000494047 VDRP11473 427 aa12□□□□□ -0.49
RFC4-214ENST00000494047 UBA1P22314 1058 aaKnown RBP12□□□□□ -0.49
RFC4-214ENST00000494047 KDELR1P24390 212 aa12□□□□□ -0.49
RFC4-214ENST00000494047 SCNN1AP37088 669 aa12□□□□□ -0.49
RFC4-214ENST00000494047 WDR4P57081 412 aaKnown RBP12□□□□□ -0.49
RFC4-214ENST00000494047 SARNPP82979 210 aaKnown RBP12□□□□□ -0.49
RFC4-214ENST00000494047 OTUD4Q01804 1114 aaKnown RBP12□□□□□ -0.49
RFC4-214ENST00000494047 NAB1Q13506 487 aa12□□□□□ -0.49
RFC4-214ENST00000494047 KRT72Q14CN4 511 aa12□□□□□ -0.49
RFC4-214ENST00000494047 BOLA3Q53S33 107 aa12□□□□□ -0.49
RFC4-214ENST00000494047 TMEM63BQ5T3F8 832 aa12□□□□□ -0.49
RFC4-214ENST00000494047 SPOPLQ6IQ16 392 aa12□□□□□ -0.49
RFC4-214ENST00000494047 TLDC1Q6P9B6 456 aa12□□□□□ -0.49
RFC4-214ENST00000494047 BZW1Q7L1Q6 419 aaKnown RBP12□□□□□ -0.49
RFC4-214ENST00000494047 ECHDC2Q86YB7 292 aa12□□□□□ -0.49
RFC4-214ENST00000494047 CCNJLQ8IV13 435 aa12□□□□□ -0.49
RFC4-214ENST00000494047 LMNTD2Q8IXW0 634 aa12□□□□□ -0.49
RFC4-214ENST00000494047 HACE1Q8IYU2 909 aa12□□□□□ -0.49
RFC4-214ENST00000494047 ENDOVQ8N8Q3 282 aaKnown RBP12□□□□□ -0.49
RFC4-214ENST00000494047 ACTL9Q8TC94 416 aa12□□□□□ -0.49
RFC4-214ENST00000494047 RAET1EQ8TD07 263 aa12□□□□□ -0.49
RFC4-214ENST00000494047 TRAF3IP1Q8TDR0 691 aaPredicted RBP12□□□□□ -0.49
RFC4-214ENST00000494047 C10orf82Q8WW14 230 aa12□□□□□ -0.49
RFC4-214ENST00000494047 TMEM143Q96AN5 459 aa12□□□□□ -0.49
RFC4-214ENST00000494047 RTP4Q96DX8 246 aa12□□□□□ -0.49
RFC4-214ENST00000494047 PAIP2Q9BPZ3 127 aaKnown RBP12□□□□□ -0.49
RFC4-214ENST00000494047 HERPUD2Q9BSE4 406 aa12□□□□□ -0.49
RFC4-214ENST00000494047 CNPY3Q9BT09 278 aa12□□□□□ -0.49
RFC4-214ENST00000494047 DCLRE1BQ9H816 532 aa12□□□□□ -0.49
RFC4-214ENST00000494047 RPF1Q9H9Y2 349 aaKnown RBP12□□□□□ -0.49
RFC4-214ENST00000494047 RNPEPL1Q9HAU8 725 aa12□□□□□ -0.49
RFC4-214ENST00000494047 DONSONQ9NYP3 566 aa12□□□□□ -0.49
RFC4-214ENST00000494047 STOML1Q9UBI4 398 aa12□□□□□ -0.49
RFC4-214ENST00000494047 RABGEF1Q9UJ41 708 aa12□□□□□ -0.49
RFC4-214ENST00000494047 ZFP69BQ9UJL9 534 aa12□□□□□ -0.49
RFC4-214ENST00000494047 PTPRJQ12913 1337 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 DOCK3Q8IZD9 2030 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 A8MXQ7 604 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 I3L4J1 428 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 HBP1O60381 514 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 CST8O60676 142 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 LRCH4O75427 683 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 KRT38O76015 456 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 ANP32DO95626 131 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 GH1P01241 217 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 IFNB1P01574 187 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 MT-ND3P03897 115 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 KRT4P19013 534 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 CALB2P22676 271 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 MARK3P27448 753 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 GCAP28676 217 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 MAGEA6P43360 314 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 ASPAP45381 313 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 PHKA2P46019 1235 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 ZNF143P52747 638 aaPredicted RBP11.99□□□□□ -0.49
RFC4-214ENST00000494047 PSMC1P62191 440 aaKnown RBP11.99□□□□□ -0.49
RFC4-214ENST00000494047 RPL7AP62424 266 aaKnown RBP11.99□□□□□ -0.49
RFC4-214ENST00000494047 IRF5Q13568 498 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 PCBP1Q15365 356 aaKnown RBP eCLIP11.99□□□□□ -0.49
RFC4-214ENST00000494047 STXBP5Q5T5C0 1151 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 C6orf163Q5TEZ5 329 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 TTC39BQ5VTQ0 682 aaPredicted RBP11.99□□□□□ -0.49
RFC4-214ENST00000494047 LVRNQ6Q4G3 990 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 CYS1Q717R9 158 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 CPNE8Q86YQ8 564 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
RFC4-214ENST00000494047 CDKL3Q8IVW4 592 aaPredicted RBP11.99□□□□□ -0.49
RFC4-214ENST00000494047 KCTD6Q8NC69 237 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 GPRC5AQ8NFJ5 357 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 OR5B17Q8NGF7 314 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 AGAP11Q8TF27 550 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 ZNF75CPQ92670 426 aaPredicted RBP11.99□□□□□ -0.49
RFC4-214ENST00000494047 MCRS1Q96EZ8 462 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 TSPAN18Q96SJ8 248 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 ARHGAP39Q9C0H5 1083 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 MTMR12Q9C0I1 747 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 CYLDQ9NQC7 956 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.99□□□□□ -0.493e-6■■■■■ 108.7
RFC4-214ENST00000494047 ITGA11Q9UKX5 1188 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 AGAP1Q9UPQ3 857 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 RIPK3Q9Y572 518 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 PTCH2Q9Y6C5 1203 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.99□□□□□ -0.49
RFC4-214ENST00000494047 COL1A2P08123 1366 aa11.99□□□□□ -0.49
RFC4-214ENST00000494047 C3orf70A6NLC5 250 aaPredicted RBP11.98□□□□□ -0.49
RFC4-214ENST00000494047 NOP56O00567 594 aaKnown RBP11.98□□□□□ -0.49
RFC4-214ENST00000494047 DPYSL4O14531 572 aa11.98□□□□□ -0.49
RFC4-214ENST00000494047 LPXNO60711 386 aa11.98□□□□□ -0.49
RFC4-214ENST00000494047 KRT16P08779 473 aa11.98□□□□□ -0.49
RFC4-214ENST00000494047 HOXC6P09630 235 aa11.98□□□□□ -0.49
RFC4-214ENST00000494047 BRD2P25440 801 aaKnown RBP11.98□□□□□ -0.49
RFC4-214ENST00000494047 GCKP35557 465 aa11.98□□□□□ -0.49
RFC4-214ENST00000494047 NR2C2P49116 596 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms