RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 FAM102AQ5T9C2 384 aaPredicted RBP14.43□□□□□ -0.1
VCP-207ENST00000493886 EXOC3L1Q86VI1 746 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 PARP9Q8IXQ6 854 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 C12orf29Q8N999 325 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 BEST2Q8NFU1 509 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 HAUS1Q96CS2 278 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 MRPL45Q9BRJ2 306 aaKnown RBP14.43□□□□□ -0.1
VCP-207ENST00000493886 TRIM6Q9C030 488 aaPredicted RBP14.43□□□□□ -0.1
VCP-207ENST00000493886 NXF3Q9H4D5 531 aaKnown RBP14.43□□□□□ -0.1
VCP-207ENST00000493886 FGFR1OP2Q9NVK5 253 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 CCT8L1PA6NM43 557 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 AGTP01019 485 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 GLRA4Q5JXX5 417 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 ANKS4BQ8N8V4 417 aa14.43□□□□□ -0.1
VCP-207ENST00000493886 C18orf25Q96B23 403 aaPredicted RBP14.43□□□□□ -0.1
VCP-207ENST00000493886 TPX2Q9ULW0 747 aaKnown RBP14.43□□□□□ -0.1
VCP-207ENST00000493886 DRG1Q9Y295 367 aaKnown RBP14.43□□□□□ -0.1
VCP-207ENST00000493886 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.43□□□□□ -0.1
VCP-207ENST00000493886 HAS3O00219 553 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 RECQL4O94761 1208 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 MYL3P08590 195 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 CYP2B6P20813 491 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 VCPP55072 806 aaKnown RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 STILQ15468 1287 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 RASAL3Q86YV0 1011 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 ALLCQ8N6M5 410 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 GLIS1Q8NBF1 620 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 CCHCR1Q8TD31 782 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 ARHGEF2Q92974 986 aaKnown RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 TBC1D31Q96DN5 1066 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 PCSK1NQ9UHG2 260 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 EFR3BQ9Y2G0 817 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 TMEM120BA0PK00 339 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 TREHO43280 583 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 RNF8O76064 485 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 PFKMP08237 780 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 CPT1AP50416 773 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 ZNF200P98182 395 aaPredicted RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 ACAP1Q15027 740 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 SNX17Q15036 470 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 OASLQ15646 514 aaKnown RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 SNCBQ16143 134 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 GOLGA7BQ2TAP0 167 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 P3H1Q32P28 736 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 ALKAL1Q6UXT8 129 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 FAM228AQ86W67 206 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 ZNF483Q8TF39 744 aaPredicted RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 TMEM40Q8WWA1 233 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 USP6NLQ92738 828 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 NKD2Q969F2 451 aaPredicted RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 APOL6Q9BWW8 343 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 TMEM165Q9HC07 324 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 RNF19AQ9NV58 838 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 CNTN3Q9P232 1028 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 TRIP12Q14669 1992 aaPredicted RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 TCP11X1B4DZS4 312 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 E5RJQ4 531 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 PIK3R2O00459 728 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 TTC4O95801 387 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 KDELR1P24390 212 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 AKAP5P24588 427 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 MIPP30301 263 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 AXLP30530 894 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 ZNF157P51786 506 aaPredicted RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 BEX3Q00994 111 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 PPP1R26Q5T8A7 1209 aaPredicted RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 OR6B2Q6IFH4 312 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 TBC1D1Q86TI0 1168 aaPredicted RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 ACOT1Q86TX2 421 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 LRRC52Q8N7C0 313 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 ROPN1BQ9BZX4 212 aaPredicted RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 MIS12Q9H081 205 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 ROPN1Q9HAT0 212 aaPredicted RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 ASNSD1Q9NWL6 643 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.42□□□□□ -0.1
VCP-207ENST00000493886 BAIAP2L1Q9UHR4 511 aa14.42□□□□□ -0.1
VCP-207ENST00000493886 PIN4Q9Y237 131 aaKnown RBP14.42□□□□□ -0.1
VCP-207ENST00000493886 MANSC4A6NHS7 340 aaPredicted RBP14.41□□□□□ -0.1
VCP-207ENST00000493886 CHUKO15111 745 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 PYGLP06737 847 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 ZSCAN5DPP0CG00 497 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 HP1BP3Q5SSJ5 553 aaPredicted RBP14.41□□□□□ -0.1
VCP-207ENST00000493886 FAM183BPQ6ZVS7 135 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 ADAM33Q9BZ11 813 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 AP5M1Q9H0R1 490 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 NME7Q9Y5B8 376 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 ITGAVP06756 1048 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 ETS1P14921 441 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 GPD1P21695 349 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 ARSEP51690 589 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 ZNF143P52747 638 aaPredicted RBP14.41□□□□□ -0.1
VCP-207ENST00000493886 DYNLT1P63172 113 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 PLCB3Q01970 1234 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 TAZQ16635 292 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 C9orf57Q5W0N0 161 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 CAPN12Q6ZSI9 719 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 SLC35B2Q8TB61 432 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 CENPTQ96BT3 561 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 C9orf72Q96LT7 481 aa14.41□□□□□ -0.1
VCP-207ENST00000493886 USP18Q9UMW8 372 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms