RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 FIZ1Q96SL8 496 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 FAM213AQ9BRX8 229 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 TMEM206Q9H813 350 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 TRPV4Q9HBA0 871 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 PANK4Q9NVE7 773 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 THG1LQ9NWX6 298 aaKnown RBP8.12□□□□□ -1.11
RBM39-238ENST00000493853 HSFX1Q9UBD0 423 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 STYXL1Q9Y6J8 313 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 PIAS3Q9Y6X2 628 aa8.12□□□□□ -1.11
RBM39-238ENST00000493853 PLXNA3P51805 1871 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 ZFHX2Q9C0A1 2572 aaPredicted RBP8.11□□□□□ -1.11
RBM39-238ENST00000493853 MYMKA6NI61 221 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 STX6O43752 255 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 MOSPD3O75425 235 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 SOAT2O75908 522 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 KRT19P08727 400 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 TMEM191BP0C7N4 346 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 FCARP24071 287 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 CDC25CP30307 473 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 NRLP54845 237 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 C1orf228Q6PIY5 440 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 ARID3BQ8IVW6 561 aaPredicted RBP8.11□□□□□ -1.11
RBM39-238ENST00000493853 KIAA2013Q8IYS2 634 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 CSGALNACT2Q8N6G5 542 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 SPPL2BQ8TCT7 592 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 GIPC2Q8TF65 315 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 C2orf15Q8WU43 125 aaKnown RBP8.11□□□□□ -1.11
RBM39-238ENST00000493853 CLDN23Q96B33 292 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 SAAL1Q96ER3 474 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 USP28Q96RU2 1077 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 TMEM209Q96SK2 561 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 ZCWPW1Q9H0M4 648 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 PCIF1Q9H4Z3 704 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 C8orf33Q9H7E9 229 aaPredicted RBP8.11□□□□□ -1.11
RBM39-238ENST00000493853 LMAN1LQ9HAT1 526 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 TRPV5Q9NQA5 729 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 OLFML3Q9NRN5 406 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 ZSCAN32Q9NX65 697 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 ABI2Q9NYB9 513 aaPredicted RBP8.11□□□□□ -1.11
RBM39-238ENST00000493853 FAM13BQ9NYF5 915 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 RBAKQ9NYW8 714 aaPredicted RBP8.11□□□□□ -1.11
RBM39-238ENST00000493853 NCDNQ9UBB6 729 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 RAB23Q9ULC3 237 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 AGAP1Q9UPQ3 857 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 PCDHB5Q9Y5E4 795 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 PCDHGA2Q9Y5H1 932 aa8.11□□□□□ -1.11
RBM39-238ENST00000493853 GOLGA8IPA6NC78 632 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 GOLGA8JA6NMD2 632 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
RBM39-238ENST00000493853 SPTLC2O15270 562 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 CHADO15335 359 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 EXTL3O43909 919 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 PRPF40AO75400 957 aaKnown RBP8.1□□□□□ -1.11
RBM39-238ENST00000493853 PRPF6O94906 941 aaKnown RBP8.1□□□□□ -1.11
RBM39-238ENST00000493853 VNN2O95498 520 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 ITGB3P05106 788 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 GARTP22102 1010 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 CCNE1P24864 410 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 ADSSP30520 456 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 POLR2BP30876 1174 aaKnown RBP8.1□□□□□ -1.11
RBM39-238ENST00000493853 AVPR1AP37288 418 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 GATA4P43694 442 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 RBP5P82980 135 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 MYL7Q01449 175 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 KCNA1Q09470 495 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 BFSP1Q12934 665 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 MYO1EQ12965 1108 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 MTAPQ13126 283 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 LRRC32Q14392 662 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 SURF1Q15526 300 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 NFE2Q16621 373 aaPredicted RBP8.1□□□□□ -1.11
RBM39-238ENST00000493853 ARHGAP29Q52LW3 1261 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 CRELD2Q6UXH1 353 aaPredicted RBP8.1□□□□□ -1.11
RBM39-238ENST00000493853 GAREM2Q75VX8 874 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 TMC8Q8IU68 726 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 TTC9BQ8N6N2 239 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 OR10T2Q8NGX3 314 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 DNAJC19Q96DA6 116 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 MSANTD3Q96H12 275 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 ANKRD36BP1Q96IX9 119 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 LPIN3Q9BQK8 851 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 IER2Q9BTL4 223 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 FAM126AQ9BYI3 521 aaPredicted RBP8.1□□□□□ -1.11
RBM39-238ENST00000493853 DNAJC25Q9H1X3 360 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 TASP1Q9H6P5 420 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 ZMYM5Q9UJ78 669 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 MAGED2Q9UNF1 606 aaPredicted RBP8.1□□□□□ -1.11
RBM39-238ENST00000493853 MTMR6Q9Y217 621 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 KCNMB2Q9Y691 235 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 DENND4AQ7Z401 1863 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 KMT2EQ8IZD2 1858 aa8.1□□□□□ -1.11
RBM39-238ENST00000493853 ZNF233A6NK53 670 aa8.09□□□□□ -1.11
RBM39-238ENST00000493853 SLC38A8A6NNN8 435 aa8.09□□□□□ -1.11
RBM39-238ENST00000493853 TNFRSF10BO14763 440 aa8.09□□□□□ -1.11
RBM39-238ENST00000493853 KIAA0391O15091 583 aaKnown RBP8.09□□□□□ -1.11
RBM39-238ENST00000493853 TNNC2P02585 160 aa8.09□□□□□ -1.11
RBM39-238ENST00000493853 FURINP09958 794 aa8.09□□□□□ -1.11
RBM39-238ENST00000493853 CSH1P0DML2 217 aa8.09□□□□□ -1.11
RBM39-238ENST00000493853 CSH2P0DML3 217 aa8.09□□□□□ -1.11
RBM39-238ENST00000493853 HAPLN1P10915 354 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms