RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 HS6ST2Q96MM7 605 aa5.26□□□□□ -1.57
SMC4-223ENST00000493695 SLC13A1Q9BZW2 595 aa5.26□□□□□ -1.57
SMC4-223ENST00000493695 VPS33BQ9H267 617 aa5.26□□□□□ -1.57
SMC4-223ENST00000493695 ZSCAN32Q9NX65 697 aa5.26□□□□□ -1.57
SMC4-223ENST00000493695 LPAR3Q9UBY5 353 aa5.26□□□□□ -1.57
SMC4-223ENST00000493695 SNX14Q9Y5W7 946 aa5.26□□□□□ -1.57
SMC4-223ENST00000493695 BTBD19C9JJ37 291 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 PRR23D1E9PI22 279 aaPredicted RBP5.25□□□□□ -1.57
SMC4-223ENST00000493695 OAZ2O95190 189 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 FGAP02671 866 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 PRR23D2P0DMB1 279 aaPredicted RBP5.25□□□□□ -1.57
SMC4-223ENST00000493695 CYP2C9P11712 490 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 XRCC6P12956 609 aaKnown RBP eCLIP5.25□□□□□ -1.57
SMC4-223ENST00000493695 HTR6P50406 440 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 ID2Q02363 134 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 RNF187Q5TA31 235 aaPredicted RBP5.25□□□□□ -1.57
SMC4-223ENST00000493695 ANKRD13BQ86YJ7 626 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 MPP5Q8N3R9 675 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 PRR18Q8N4B5 295 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 SLC15A4Q8N697 577 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 CDK5RAP3Q96JB5 506 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 VCPIP1Q96JH7 1222 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 C17orf80Q9BSJ5 609 aa5.25□□□□□ -1.57
SMC4-223ENST00000493695 LY6G6EA0A0G2JKS1 128 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 POU2F2P09086 479 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 PSG1P11464 419 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 ME1P48163 572 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 CC2D1BQ5T0F9 858 aaKnown RBP5.24□□□□□ -1.57
SMC4-223ENST00000493695 EMC10Q5UCC4 262 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 COLCA1Q6ZS62 124 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 RAPGEF4Q8WZA2 1011 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 MAP4K1Q92918 833 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 PPP2R3CQ969Q6 453 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 THOC3Q96J01 351 aaKnown RBP5.24□□□□□ -1.57
SMC4-223ENST00000493695 SIGLEC11Q96RL6 698 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 BRINP2Q9C0B6 783 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 HIPK2Q9H2X6 1198 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 ASIC5Q9NY37 505 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 STAP2Q9UGK3 403 aa5.24□□□□□ -1.57
SMC4-223ENST00000493695 MT-CO3P00414 261 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 PHKG2P15735 406 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 SLC11A2P49281 568 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 THBS3P49746 956 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 DGKEP52429 567 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 NKX6-1P78426 367 aaPredicted RBP5.23□□□□□ -1.57
SMC4-223ENST00000493695 PSG6Q00889 435 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 ZIK1Q3SY52 487 aaPredicted RBP5.23□□□□□ -1.57
SMC4-223ENST00000493695 ANO7Q6IWH7 933 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 SFTPA1Q8IWL2 248 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.23□□□□□ -1.57
SMC4-223ENST00000493695 GRAMD1CQ8IYS0 662 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 SPARTQ8N0X7 666 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 DNAJC5GQ8N7S2 189 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 ZNF548Q8NEK5 533 aaPredicted RBP5.23□□□□□ -1.57
SMC4-223ENST00000493695 GBA2Q9HCG7 927 aaPredicted RBP5.23□□□□□ -1.57
SMC4-223ENST00000493695 HEY2Q9UBP5 337 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 ZNF112Q9UJU3 913 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 PROCRQ9UNN8 238 aa5.23□□□□□ -1.57
SMC4-223ENST00000493695 LUC7L2Q9Y383 392 aaKnown RBP5.23□□□□□ -1.57
SMC4-223ENST00000493695 ZMYM2Q9UBW7 1377 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 B4DGG1 531 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 ALG1L2C9J202 215 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 KCNA3P22001 575 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 PRKAR1BP31321 381 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 MTHFSP49914 203 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 TWIST1Q15672 202 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 NPY5RQ15761 445 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 PLA1AQ53H76 456 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 DENND2CQ68D51 928 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 PRPF38AQ8NAV1 312 aaKnown RBP5.22□□□□□ -1.57
SMC4-223ENST00000493695 BPIFB1Q8TDL5 484 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 HSPBAP1Q96EW2 488 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 MVB12AQ96EY5 273 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 LYZL4Q96KX0 146 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 P2RX7Q99572 595 aaKnown RBP5.22□□□□□ -1.57
SMC4-223ENST00000493695 GTPBP4Q9BZE4 634 aaKnown RBP5.22□□□□□ -1.57
SMC4-223ENST00000493695 FAM234AQ9H0X4 552 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 SNX15Q9NRS6 342 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 HS3ST3B1Q9Y662 390 aa5.22□□□□□ -1.57
SMC4-223ENST00000493695 FER1L4A9Z1Z3 1794 aa5.21□□□□□ -1.57
SMC4-223ENST00000493695 FAM90A8PA6NJQ4 464 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 PMPCBO75439 489 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 FAM90A13PP0C7W8 464 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 FAM90A24PP0C7X0 464 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 T-ENOLP0DO92 83 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 GKP32189 559 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 CDKN2AP42771 156 aaKnown RBP5.21□□□□□ -1.58
SMC4-223ENST00000493695 HTRA4P83105 476 aaPredicted RBP5.21□□□□□ -1.58
SMC4-223ENST00000493695 LMAN2Q12907 356 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 C4orf46Q504U0 113 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 DAB2IPQ5VWQ8 1189 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 LMBRD2Q68DH5 695 aaPredicted RBP5.21□□□□□ -1.58
SMC4-223ENST00000493695 LVRNQ6Q4G3 990 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 RANBP10Q6VN20 620 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 MAP3K14Q99558 947 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 MS4A7Q9GZW8 240 aaPredicted RBP5.21□□□□□ -1.58
SMC4-223ENST00000493695 USP22Q9UPT9 525 aa5.21□□□□□ -1.58
SMC4-223ENST00000493695 ANKRD62A6NC57 917 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 THP07101 528 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 AMPD3Q01432 767 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms