RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 C2orf15Q8WU43 125 aaKnown RBP13.32□□□□□ -0.28
VPS52-220ENST00000493674 HES6Q96HZ4 224 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 BTBD6Q96KE9 485 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 ZBP1Q9H171 429 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 SYNCQ9H7C4 482 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 ST7Q9NRC1 585 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 PCDHB12Q9Y5F1 795 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 ALG6Q9Y672 507 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 NOTCH4Q99466 2003 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 SZT2Q5T011 3432 aa13.32□□□□□ -0.28
VPS52-220ENST00000493674 MTMR11A4FU01 709 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 C2CD4BA6NLJ0 364 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 DPYSL4O14531 572 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 ENC1O14682 589 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 TNFRSF10BO14763 440 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 ADAM12O43184 909 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 TLL1O43897 1013 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 FGF18O76093 207 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 KRT3P12035 628 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 RFC1P35251 1148 aaPredicted RBP13.31□□□□□ -0.28
VPS52-220ENST00000493674 MAP3K7CLP57077 242 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 ADIGQ0VDE8 80 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 SHHQ15465 462 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 DNTTIP2Q5QJE6 756 aaKnown RBP13.31□□□□□ -0.28
VPS52-220ENST00000493674 TRNP1Q6NT89 227 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 VSTM1Q6UX27 236 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 BHLHA9Q7RTU4 235 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 GPRIN1Q7Z2K8 1008 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 SPATA2LQ8IUW3 424 aaPredicted RBP13.31□□□□□ -0.28
VPS52-220ENST00000493674 FBXO22Q8NEZ5 403 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 SPPL2BQ8TCT7 592 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 RIN2Q8WYP3 895 aaPredicted RBP13.31□□□□□ -0.28
VPS52-220ENST00000493674 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 C8orf48Q96LL4 319 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 MCEEQ96PE7 176 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 KCNK16Q96T55 309 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 CLSTN3Q9BQT9 956 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 ZBED2Q9BTP6 218 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 SELENOOQ9BVL4 669 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 METTL5Q9NRN9 209 aaKnown RBP13.31□□□□□ -0.28
VPS52-220ENST00000493674 ASNSD1Q9NWL6 643 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 IP6K2Q9UHH9 426 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 SNX12Q9UMY4 172 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 LZTS1Q9Y250 596 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 PCDHB5Q9Y5E4 795 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 MRFAP1Q9Y605 127 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 USP3Q9Y6I4 520 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 MYO9BQ13459 2157 aa13.31□□□□□ -0.28
VPS52-220ENST00000493674 WDR27A2RRH5 827 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 LINC01553A4QN01 128 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 C5orf67F2Z3F1 127 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 GOLGA8SH3BPF8 625 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 MYO1FO00160 1098 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 CES2O00748 559 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 DDX3YO15523 660 aaKnown RBP13.3□□□□□ -0.28
VPS52-220ENST00000493674 NCK2O43639 380 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 ABLIM3O94929 683 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 FBXO21O94952 628 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 COMTP21964 271 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 CYP2F1P24903 491 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 CTNNA2P26232 953 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 SLC1A1P43005 524 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 SMAD3P84022 425 aaKnown RBP13.3□□□□□ -0.28
VPS52-220ENST00000493674 ROR1Q01973 937 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 TUBB2AQ13885 445 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 MESDQ14696 234 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 FAM102AQ5T9C2 384 aaPredicted RBP13.3□□□□□ -0.28
VPS52-220ENST00000493674 PM20D1Q6GTS8 502 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 OR6B2Q6IFH4 312 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 PEX26Q7Z412 305 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 CPNE8Q86YQ8 564 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 SCUBE3Q8IX30 993 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 CLEC4CQ8WTT0 213 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 C11orf84Q9BUA3 381 aaPredicted RBP13.3□□□□□ -0.28
VPS52-220ENST00000493674 TUBB2BQ9BVA1 445 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 PLVAPQ9BX97 442 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 CRISPLD1Q9H336 500 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 RXFP1Q9HBX9 757 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 CNGB3Q9NQW8 809 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 IL37Q9NZH6 218 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 FNIP2Q9P278 1114 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 HSFX1Q9UBD0 423 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 AMFRQ9UKV5 643 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 RWDD3Q9Y3V2 267 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 HYOU1Q9Y4L1 999 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 CDY1Q9Y6F8 540 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 C2orf16Q68DN1 1984 aa13.3□□□□□ -0.28
VPS52-220ENST00000493674 TMEM265A0A087WTH1 108 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 MIF4GDA9UHW6 222 aaKnown RBP13.29□□□□□ -0.28
VPS52-220ENST00000493674 F8VP50 259 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 PIK3R2O00459 728 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 TRIM66O15016 1216 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 ARHGEF15O94989 841 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 URODP06132 367 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 GLI1P08151 1106 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 CTSAP10619 480 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 HAPLN1P10915 354 aaPredicted RBP13.29□□□□□ -0.28
VPS52-220ENST00000493674 CPB1P15086 417 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 CTNNA1P35221 906 aaKnown RBP13.29□□□□□ -0.28
VPS52-220ENST00000493674 FLT3P36888 993 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms