RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ZNF394Q53GI3 561 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 IER5LQ5T953 404 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 LCE2DQ5TA82 110 aaPredicted RBP7.39□□□□□ -1.23
TOP3A-207ENST00000493648 CC2D1AQ6P1N0 951 aaPredicted RBP7.39□□□□□ -1.23
TOP3A-207ENST00000493648 C1orf228Q6PIY5 440 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 TPRG1Q6ZUI0 275 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 FAM114A1Q8IWE2 563 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 ARL14EPQ8N8R7 260 aaPredicted RBP7.39□□□□□ -1.23
TOP3A-207ENST00000493648 TMEM105Q8N8V8 129 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 OVCA2Q8WZ82 227 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 USP13Q92995 863 aaPredicted RBP7.39□□□□□ -1.23
TOP3A-207ENST00000493648 FBXO32Q969P5 355 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 RSPRY1Q96DX4 576 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 NT5C1BQ96P26 610 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 TWNKQ96RR1 684 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 SMOQ99835 787 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 DDX23Q9BUQ8 820 aaKnown RBP7.39□□□□□ -1.23
TOP3A-207ENST00000493648 DUSP16Q9BY84 665 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 OSBPL6Q9BZF3 934 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 UBXN6Q9BZV1 441 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 SMG9Q9H0W8 520 aaKnown RBP7.39□□□□□ -1.23
TOP3A-207ENST00000493648 C8orf33Q9H7E9 229 aaPredicted RBP7.39□□□□□ -1.23
TOP3A-207ENST00000493648 HEBP1Q9NRV9 189 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 GKN1Q9NS71 199 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 KRT82Q9NSB4 513 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 CHORDC1Q9UHD1 332 aaPredicted RBP7.39□□□□□ -1.23
TOP3A-207ENST00000493648 KIAA1257Q9ULG3 409 aa7.39□□□□□ -1.23
TOP3A-207ENST00000493648 C2orf78A6NCI8 922 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 ZNF840PA6NDX5 716 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 TNFRSF10BO14763 440 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 TADA3O75528 432 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 BEST1O76090 585 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 VDRP11473 427 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 PRKCSHP14314 528 aaPredicted RBP7.38□□□□□ -1.23
TOP3A-207ENST00000493648 SLC5A3P53794 718 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 RAD23BP54727 409 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 PTPN5P54829 565 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 AMPD2Q01433 879 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 UBXN2BQ14CS0 331 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 PPP1R26Q5T8A7 1209 aaPredicted RBP7.38□□□□□ -1.23
TOP3A-207ENST00000493648 SNX30Q5VWJ9 437 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 ARHGAP17Q68EM7 881 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 CWF19L1Q69YN2 538 aaKnown RBP7.38□□□□□ -1.23
TOP3A-207ENST00000493648 SASS6Q6UVJ0 657 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 CLEC20AQ6ZU45 233 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 PPM1KQ8N3J5 372 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 DTWD2Q8NBA8 298 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 SLC4A11Q8NBS3 891 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 TTC16Q8NEE8 873 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 ZMIZ2Q8NF64 920 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 PJA1Q8NG27 643 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 SCAMP5Q8TAC9 235 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 GPT2Q8TD30 523 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 FAM3CQ92520 227 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 EXOC4Q96A65 974 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 JAKMIP2Q96AA8 810 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 MSANTD3Q96H12 275 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 CNOT6LQ96LI5 555 aaKnown RBP7.38□□□□□ -1.23
TOP3A-207ENST00000493648 FAM81BQ96LP2 452 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 LRRC3BQ96PB8 259 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 ARID3AQ99856 593 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 THAP9Q9H5L6 903 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 PNPLA8Q9NP80 782 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 TLR8Q9NR97 1041 aaKnown RBP7.38□□□□□ -1.23
TOP3A-207ENST00000493648 TMEM30AQ9NV96 361 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 IL37Q9NZH6 218 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 GCNT4Q9P109 453 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 ARHGAP26Q9UNA1 814 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 PCDHB4Q9Y5E5 795 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 PIAS3Q9Y6X2 628 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 ANAPC1Q9H1A4 1944 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 OBSL1O75147 1896 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 MUC3AQ02505 3323 aa7.38□□□□□ -1.23
TOP3A-207ENST00000493648 NCANO14594 1321 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 FAM92AA1XBS5 289 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 ARNTLO00327 626 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 DCNP07585 359 aaKnown RBP7.37□□□□□ -1.23
TOP3A-207ENST00000493648 PAEPP09466 180 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 MBL2P11226 248 aaPredicted RBP7.37□□□□□ -1.23
TOP3A-207ENST00000493648 CD19P15391 556 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 TCF3P15923 654 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 ACO1P21399 889 aaKnown RBP7.37□□□□□ -1.23
TOP3A-207ENST00000493648 CD72P21854 359 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 MAGEA9P43362 315 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 PSEN1P49768 467 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 MFAP3P55082 362 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 SLC7A9P82251 487 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 GCNT1Q02742 428 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 NR1H3Q13133 447 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 RUNX3Q13761 415 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 MTF1Q14872 753 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 PDGFRLQ15198 375 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 ITPRIPL2Q3MIP1 535 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 DPCR1Q3MIW9 517 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 SGO2Q562F6 1265 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 HECTD3Q5T447 861 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 TMEM270Q6UE05 265 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 MAMSTRQ6ZN01 415 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 GBP6Q6ZN66 633 aa7.37□□□□□ -1.23
TOP3A-207ENST00000493648 RRAGAQ7L523 313 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms