RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 PNKPQ96T60 521 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 TTLL2Q9BWV7 592 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 ZMIZ1Q9ULJ6 1067 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 CACNA1GO43497 2377 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 ZZEF1O43149 2961 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 IGF2RP11717 2491 aa13.16□□□□□ -0.3
SAMM50-205ENST00000493621 FAM208BQ5VWN6 2430 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 A0A087X0B3 334 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 F8VP50 259 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 SGK1O00141 431 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 SLC9A3R1O14745 358 aaPredicted RBP13.15□□□□□ -0.3
SAMM50-205ENST00000493621 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
SAMM50-205ENST00000493621 MAP3K13O43283 966 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 KAT7O95251 611 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 TOP3BO95985 862 aaKnown RBP13.15□□□□□ -0.3
SAMM50-205ENST00000493621 APODP05090 189 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 CEACAM1P13688 526 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 CSRP1P21291 193 aaKnown RBP13.15□□□□□ -0.3
SAMM50-205ENST00000493621 PPP3CCP48454 512 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 NOP14P78316 857 aaKnown RBP13.15□□□□□ -0.3
SAMM50-205ENST00000493621 KDSRQ06136 332 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 MESP2Q0VG99 397 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
SAMM50-205ENST00000493621 RESTQ13127 1097 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 SURF1Q15526 300 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 FAM173BQ6P4H8 233 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 ARMCX6Q7L4S7 300 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 LPCAT2Q7L5N7 544 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 C12orf40Q86WS4 652 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 CCDC65Q8IXS2 484 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 TMEFF1Q8IYR6 380 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 IL17RCQ8NAC3 791 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 GLIS3Q8NEA6 775 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 OLIG1Q8TAK6 271 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 HPS3Q969F9 1004 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 MRPL45Q9BRJ2 306 aaKnown RBP13.15□□□□□ -0.3
SAMM50-205ENST00000493621 SNX25Q9H3E2 840 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
SAMM50-205ENST00000493621 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 WASF3Q9UPY6 502 aa13.15□□□□□ -0.3
SAMM50-205ENST00000493621 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.31
SAMM50-205ENST00000493621 OLFM2O95897 454 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
SAMM50-205ENST00000493621 MBL2P11226 248 aaPredicted RBP13.14□□□□□ -0.31
SAMM50-205ENST00000493621 GNL1P36915 607 aaPredicted RBP13.14□□□□□ -0.31
SAMM50-205ENST00000493621 P2RY2P41231 377 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 CACNA2D1P54289 1103 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 TAF10Q12962 218 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 TRIM61Q5EBN2 209 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 TDRD10Q5VZ19 366 aaKnown RBP13.14□□□□□ -0.31
SAMM50-205ENST00000493621 RHBDF2Q6PJF5 856 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 TRAPPC11Q7Z392 1133 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 WDR49Q8IV35 697 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 FRMD1Q8N878 549 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 KIAA1958Q8N8K9 716 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 DEFB124Q8NES8 71 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 OR6B3Q8NGW1 331 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 WHAMMQ8TF30 809 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 SPACA7Q96KW9 195 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 C8orf48Q96LL4 319 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 SLITRK1Q96PX8 696 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 FNBP1Q96RU3 617 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 POLMQ9NP87 494 aaPredicted RBP13.14□□□□□ -0.31
SAMM50-205ENST00000493621 ZDHHC4Q9NPG8 344 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 ARHGEF4Q9NR80 690 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 HSPBP1Q9NZL4 362 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 EVLQ9UI08 416 aaPredicted RBP13.14□□□□□ -0.31
SAMM50-205ENST00000493621 NME7Q9Y5B8 376 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 MYH10P35580 1976 aa13.14□□□□□ -0.31
SAMM50-205ENST00000493621 TNFRSF10BO14763 440 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 ADH1CP00326 375 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 CST3P01034 146 aaPredicted RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 DLATP10515 647 aaKnown RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 ADH5P11766 374 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 PTPN1P18031 435 aaKnown RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 EIF2DP41214 584 aaKnown RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 PTGER3P43115 390 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 KIR2DL1P43626 348 aaPredicted RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 MAPK8P45983 427 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 LMAN2Q12907 356 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 EOGTQ5NDL2 527 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 DDX42Q86XP3 938 aaKnown RBP eCLIP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 PDILTQ8N807 584 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 KDF1Q8NAX2 398 aaPredicted RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 RDH13Q8NBN7 331 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 HMGB4Q8WW32 186 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 SCNM1Q9BWG6 230 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 NUSAP1Q9BXS6 441 aaKnown RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 ZNF518BQ9C0D4 1074 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 DPEP3Q9H4B8 488 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 UPF2Q9HAU5 1272 aaKnown RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 TMEM74BQ9NUR3 256 aa13.13□□□□□ -0.31
SAMM50-205ENST00000493621 TMEM30AQ9NV96 361 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms