RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ADAMTS1Q9UHI8 967 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 TRMT112Q9UI30 125 aaKnown RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 MAFFQ9ULX9 164 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 ARHGAP26Q9UNA1 814 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 PLAGL2Q9UPG8 496 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 CAB39Q9Y376 341 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-205ENST00000493587 MROH5Q6ZUA9 1318 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 WDR90Q96KV7 1748 aa7.14□□□□□ -1.27
VPS13B-205ENST00000493587 A0A0B4J203 849 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 FAM47DPA6NHR8 397 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 CYP26A1O43174 497 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 RIPK2O43353 540 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ASNA1O43681 348 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ABCB4P21439 1286 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ZAP70P43403 619 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 HNRNPFP52597 415 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 POU5F1Q01860 360 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 GRM2Q14416 872 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 EFTUD2Q15029 972 aaKnown RBP eCLIP7.13□□□□□ -1.274e-6■■■■□ 25.8
VPS13B-205ENST00000493587 INSCQ1MX18 579 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 FIP1L1Q6UN15 594 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 NET1Q7Z628 596 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF598Q86UK7 904 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 SLC51BQ86UW2 128 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 SGMS1Q86VZ5 419 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TICAM1Q8IUC6 712 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TBC1D10CQ8IV04 446 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PROM2Q8N271 834 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ALLCQ8N6M5 410 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 CHPT1Q8WUD6 406 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 BIRC8Q96P09 236 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 OSBPL8Q9BZF1 889 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 SERHL2Q9H4I8 314 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 FBXO6Q9NRD1 293 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ABI2Q9NYB9 513 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 NCKIPSDQ9NZQ3 722 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 KCNN3Q9UGI6 736 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PARP2Q9UGN5 583 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 CFL2Q9Y281 166 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 CEPT1Q9Y6K0 416 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TRIM75PA6NK02 468 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 RPN1P04843 607 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 FAM228BP0C875 321 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 MYBP10242 640 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PIK3CAP42336 1068 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 P2RX3P56373 397 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PRKCEQ02156 737 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 CDK18Q07002 472 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 BNIP3Q12983 259 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 HIC1Q14526 733 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 MAPK11Q15759 364 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 NFE2Q16621 373 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF658Q5TYW1 1059 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PPP4R4Q6NUP7 873 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 RWDD4Q6NW29 188 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 FRA10AC1Q70Z53 315 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 AKAP14Q86UN6 197 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 CCDC105Q8IYK2 499 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 REXO1Q8N1G1 1221 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 GSTCDQ8NEC7 633 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 SCFD2Q8WU76 684 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 KCTD4Q8WVF5 259 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 KBTBD7Q8WVZ9 684 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ANKS1AQ92625 1134 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TBATAQ96M53 351 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 LRGUKQ96M69 825 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TRIM56Q9BRZ2 755 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ZSCAN5AQ9BUG6 496 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 HEMGNQ9BXL5 484 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ADAM33Q9BZ11 813 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 RIC8AQ9NPQ8 531 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 EMILIN3Q9NT22 766 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 SNTG2Q9NY99 539 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 MRPL39Q9NYK5 338 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PPARGC1AQ9UBK2 798 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PCSK1NQ9UHG2 260 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 GNPTGQ9UJJ9 305 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 HDAC9Q9UKV0 1011 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 STXBP5LQ9Y2K9 1186 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 NR2E3Q9Y5X4 410 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 AP4B1Q9Y6B7 739 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 A0A1W2PQ72 361 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TYW5A2RUC4 315 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 FAM25EA8MYX2 175 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 F8W8V4 182 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TK2O00142 265 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ARHGAP33O14559 1287 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ATP2A1O14983 1001 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TLR2O60603 784 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 RPS6KA4O75676 772 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 MCF2P10911 925 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PTPN9P43378 593 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PHKA1P46020 1223 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 RPS3AP61247 264 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 SSRP1Q08945 709 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 KLHL30Q0D2K2 578 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TRAF2Q12933 501 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 MPP2Q14168 576 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 EPHA7Q15375 998 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TLR1Q15399 786 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms