RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 GPR88Q9GZN0 384 aa10.89□□□□□ -0.67
SOX2-OT-215ENST00000493521 LINC00597Q9H2U6 94 aa10.89□□□□□ -0.67
SOX2-OT-215ENST00000493521 DPEP3Q9H4B8 488 aa10.89□□□□□ -0.67
SOX2-OT-215ENST00000493521 AGPAT3Q9NRZ7 376 aa10.89□□□□□ -0.67
SOX2-OT-215ENST00000493521 USP18Q9UMW8 372 aa10.89□□□□□ -0.67
SOX2-OT-215ENST00000493521 PCDHB5Q9Y5E4 795 aa10.89□□□□□ -0.67
SOX2-OT-215ENST00000493521 WNT6Q9Y6F9 365 aa10.89□□□□□ -0.67
SOX2-OT-215ENST00000493521 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.89□□□□□ -0.67
SOX2-OT-215ENST00000493521 DPYSL4O14531 572 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 IL18RAPO95256 599 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 PDGFRBP09619 1106 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 GARTP22102 1010 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 TUFMP49411 452 aaKnown RBP10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 CASP4P49662 377 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 MARSP56192 900 aaKnown RBP10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 GSDMDP57764 484 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 TBX2Q13207 712 aaPredicted RBP10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 RUNX3Q13761 415 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 GAB4Q2WGN9 574 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 VWA3BQ502W6 1294 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 MIIPQ5JXC2 388 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 CEP135Q66GS9 1140 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 LIMS2Q7Z4I7 341 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 ITIH5Q86UX2 942 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 SCN4BQ8IWT1 228 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 ADGRF2Q8IZF7 708 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 THEM5Q8N1Q8 247 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 GPD1LQ8N335 351 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 SPEM1Q8N4L4 309 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 ARL14EPQ8N8R7 260 aaPredicted RBP10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 CACTINQ8WUQ7 758 aaKnown RBP10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 MYLPFQ96A32 169 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 TSPAN18Q96SJ8 248 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 KCNF1Q9H3M0 494 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 TRPC7Q9HCX4 862 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 HSFX1Q9UBD0 423 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 DSEQ9UL01 958 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 EXOC7Q9UPT5 735 aa10.88□□□□□ -0.67
SOX2-OT-215ENST00000493521 ITIH6Q6UXX5 1313 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 SDK1Q7Z5N4 2213 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 CLDN5O00501 218 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 DCLK1O15075 740 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 SLC16A3O15427 465 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 AKAP3O75969 853 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 NOL4O94818 638 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 EPB41P11171 864 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 BDNFP23560 247 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 CDC25CP30307 473 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 PSMC2P35998 433 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 PGFP49763 221 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 GALK1P51570 392 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 CYP2J2P51589 502 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 CCR3P51677 355 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 SNRPFP62306 86 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 LRMPQ12912 555 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 SIM2Q14190 667 aaPredicted RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 PUM1Q14671 1186 aaKnown RBP eCLIP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 VEPH1Q14D04 833 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 SF3A2Q15428 464 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 ZNF77Q15935 545 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 ITPRIPL2Q3MIP1 535 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 ARHGAP29Q52LW3 1261 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 ARHGAP15Q53QZ3 475 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 TMEM196Q5HYL7 178 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 FKBP15Q5T1M5 1219 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 FAM171BQ6P995 826 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 MAMSTRQ6ZN01 415 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 RALGPS2Q86X27 583 aaPredicted RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 LRRC8AQ8IWT6 810 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 FAM160A2Q8N612 972 aaPredicted RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 CELF5Q8N6W0 485 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 WBP2Q969T9 261 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 ZNF560Q96MR9 790 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 HHIPQ96QV1 700 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 NDST4Q9H3R1 872 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 C8orf33Q9H7E9 229 aaPredicted RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 ZDHHC4Q9NPG8 344 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 DMAC2Q9NW81 257 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 GDAP2Q9NXN4 497 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 OBP2AQ9NY56 170 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 HSPBP1Q9NZL4 362 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 GCNT4Q9P109 453 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 CGNQ9P2M7 1197 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 INVSQ9Y283 1065 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 ZKSCAN5Q9Y2L8 839 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 HELZP42694 1942 aaKnown RBP10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 NCOR2Q9Y618 2525 aa10.87□□□□□ -0.67
SOX2-OT-215ENST00000493521 A0A1W2PQC6 194 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 EXOC3O60645 756 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 HUS1O60921 280 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 RNF40O75150 1001 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 TMEM191BP0C7N4 346 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 HNRNPLP14866 589 aaKnown RBP eCLIP10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 WEE1P30291 646 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 ABCD1P33897 745 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 GJA4P35212 333 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 RAP1GAPP47736 663 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 TSPY1Q01534 308 aa10.86□□□□□ -0.67
SOX2-OT-215ENST00000493521 GOLGA8FQ08AF8 430 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms