RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 MYH10P35580 1976 aa18.15■□□□□ 0.5
LIME1-208ENST00000493265 PIEZO1Q92508 2521 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 PTPRDP23468 1912 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 C19orf67A6NJJ6 358 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 XPO1O14980 1071 aaKnown RBP18.14■□□□□ 0.49
LIME1-208ENST00000493265 AKR1B10O60218 316 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 LCP1P13796 627 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 GPD2P43304 727 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 EPHB3P54753 998 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 MTMR3Q13615 1198 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 TAF12Q16514 161 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 CLEC16AQ2KHT3 1053 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 CTC1Q2NKJ3 1217 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 PKDCCQ504Y2 493 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 PMF1Q6P1K2 205 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 GPRIN1Q7Z2K8 1008 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 PIGZQ86VD9 579 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 WDTC1Q8N5D0 677 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 SLC30A5Q8TAD4 765 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 CASP10Q92851 521 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 PDLIM2Q96JY6 352 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 C8orf48Q96LL4 319 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 CCDC42Q96M95 316 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 BAG1Q99933 345 aaPredicted RBP18.14■□□□□ 0.49
LIME1-208ENST00000493265 SYT11Q9BT88 431 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 LHX5Q9H2C1 402 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 NHEJ1Q9H9Q4 299 aaPredicted RBP18.14■□□□□ 0.49
LIME1-208ENST00000493265 ADAMTS1Q9UHI8 967 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 DPP7Q9UHL4 492 aa18.14■□□□□ 0.49
LIME1-208ENST00000493265 MAGED2Q9UNF1 606 aaPredicted RBP18.14■□□□□ 0.49
LIME1-208ENST00000493265 DDX3XO00571 662 aaKnown RBP eCLIP18.13■□□□□ 0.491e-24■■□□□ 14
LIME1-208ENST00000493265 MBTPS2O43462 519 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 TBX10O75333 385 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 ZMYND10O75800 440 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 GLP2RO95838 553 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 SRGAP2BP0DMP2 458 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 CCDC173Q0VFZ6 552 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 VEPH1Q14D04 833 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 CYP26C1Q6V0L0 522 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 TRIM72Q6ZMU5 477 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 DNAAF5Q86Y56 855 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 OLIG1Q8TAK6 271 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 SLC35F5Q8WV83 523 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 NOX5Q96PH1 765 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 SYNCQ9H7C4 482 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 LRRC4Q9HBW1 653 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 CSNK1G1Q9HCP0 422 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 HSFX1Q9UBD0 423 aa18.13■□□□□ 0.49
LIME1-208ENST00000493265 A0A087X0T9 212 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 CCDC195A0A1B0GUA6 201 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 SOWAHDA6NJG2 315 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 SLC38A8A6NNN8 435 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 LSM8O95777 96 aaKnown RBP18.12■□□□□ 0.49
LIME1-208ENST00000493265 C1RP00736 705 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 FAM228BP0C875 321 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 SLC5A3P53794 718 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 NOMO3P69849 1222 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 GFPT1Q06210 699 aaPredicted RBP18.12■□□□□ 0.49
LIME1-208ENST00000493265 PDCLQ13371 301 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 PLD1Q13393 1074 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 ADAM15Q13444 863 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 KCNC3Q14003 757 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 SMAD2Q15796 467 aaKnown RBP18.12■□□□□ 0.49
LIME1-208ENST00000493265 C2CD6Q53TS8 623 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 RARS2Q5T160 578 aaKnown RBP18.12■□□□□ 0.49
LIME1-208ENST00000493265 TMC5Q6UXY8 1006 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 PHLDB2Q86SQ0 1253 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 ELMOD1Q8N336 334 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 SCAMP5Q8TAC9 235 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 HDAC7Q8WUI4 952 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 PPP1R13BQ96KQ4 1090 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 MIS12Q9H081 205 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 SPTLC3Q9NUV7 552 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 DZANK1Q9NVP4 752 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 TAS2R14Q9NYV8 317 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 TJP2Q9UDY2 1190 aa18.12■□□□□ 0.49
LIME1-208ENST00000493265 HHLA1C9JL84 531 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 CYP1A1P04798 512 aaPredicted RBP18.11■□□□□ 0.49
LIME1-208ENST00000493265 NSFP46459 744 aaKnown RBP18.11■□□□□ 0.49
LIME1-208ENST00000493265 PLA2G4AP47712 749 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 TKTL1P51854 596 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 KIF11P52732 1056 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 USP46P62068 366 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 CDK17Q00537 523 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 ADIGQ0VDE8 80 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
LIME1-208ENST00000493265 MTF1Q14872 753 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 CYP4A22Q5TCH4 519 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 MMS22LQ6ZRQ5 1243 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 DENND5BQ6ZUT9 1274 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 ERICH1Q86X53 443 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 TMTC1Q8IUR5 882 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 NUP93Q8N1F7 819 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 SIX6OS1Q8N1H7 587 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 FEZF2Q8TBJ5 459 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 SPATA17Q96L03 361 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 ZNF512Q96ME7 567 aaPredicted RBP18.11■□□□□ 0.49
LIME1-208ENST00000493265 CPXM1Q96SM3 734 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 PIDD1Q9HB75 910 aa18.11■□□□□ 0.49
LIME1-208ENST00000493265 MUTYHQ9UIF7 546 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms