RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 GOLGA7BQ2TAP0 167 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 SLC39A12Q504Y0 691 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 HGSNATQ68CP4 663 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 WDR59Q6PJI9 974 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 ZNF571Q7Z3V5 609 aaPredicted RBP14.2□□□□□ -0.14
MSH6-208ENST00000493177 ZNF677Q86XU0 584 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 TMTC1Q8IUR5 882 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 SPATA2LQ8IUW3 424 aaPredicted RBP14.2□□□□□ -0.14
MSH6-208ENST00000493177 LRRC8AQ8IWT6 810 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 ST13P5Q8NFI4 369 aaPredicted RBP14.2□□□□□ -0.14
MSH6-208ENST00000493177 MYCBPAPQ8TBZ2 947 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 ZNF606Q8WXB4 792 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 TFAP2BQ92481 460 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 FGF13Q92913 245 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 MYLPFQ96A32 169 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 CYFIP2Q96F07 1278 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 ASIC4Q96FT7 647 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 CHP1Q99653 195 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 ARHGAP20Q9P2F6 1191 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 HESX1Q9UBX0 185 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 MAFFQ9ULX9 164 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 NUMBLQ9Y6R0 609 aa14.2□□□□□ -0.14
MSH6-208ENST00000493177 ATP8B3O60423 1300 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 M0QYV0 167 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 ZNF197O14709 1029 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 AKR1B10O60218 316 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 MICAL2O94851 1124 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 PAPLNO95428 1278 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 MMEP08473 750 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 MYL4P12829 197 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 EPHB3P54753 998 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 STILQ15468 1287 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 CNGA2Q16280 664 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 PPP1R26Q5T8A7 1209 aaPredicted RBP14.19□□□□□ -0.14
MSH6-208ENST00000493177 ARHGAP17Q68EM7 881 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 C4orf50Q6ZRC1 276 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 LRRTM3Q86VH5 581 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 PASD1Q8IV76 773 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 CCDC112Q8NEF3 446 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 FLCNQ8NFG4 579 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 ITFG1Q8TB96 612 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 SLC2A14Q8TDB8 520 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 MCRS1Q96EZ8 462 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 CCDC42Q96M95 316 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 SEPT5Q99719 369 aaPredicted RBP14.19□□□□□ -0.14
MSH6-208ENST00000493177 NHEJ1Q9H9Q4 299 aaPredicted RBP14.19□□□□□ -0.14
MSH6-208ENST00000493177 ASAH2Q9NR71 780 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 TMLHEQ9NVH6 421 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 NOCTQ9UK39 431 aaKnown RBP14.19□□□□□ -0.14
MSH6-208ENST00000493177 TSPAN16Q9UKR8 245 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 YIPF1Q9Y548 306 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 CEP83Q9Y592 693 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 NOTCH4Q99466 2003 aa14.19□□□□□ -0.14
MSH6-208ENST00000493177 FAM170AA1A519 330 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 SOWAHDA6NJG2 315 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 O00370 1275 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 CLDN5O00501 218 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 NARSO43776 548 aaKnown RBP14.18□□□□□ -0.14
MSH6-208ENST00000493177 PDGFBP01127 241 aaPredicted RBP14.18□□□□□ -0.14
MSH6-208ENST00000493177 CYLC1P35663 651 aaPredicted RBP14.18□□□□□ -0.14
MSH6-208ENST00000493177 CDK17Q00537 523 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 FMO1Q01740 532 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 DUSP4Q13115 394 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 GPR17Q13304 367 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 TAF12Q16514 161 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 NFE2Q16621 373 aaPredicted RBP14.18□□□□□ -0.14
MSH6-208ENST00000493177 MGAT5BQ3V5L5 792 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 FAM171BQ6P995 826 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 UBA3Q8TBC4 463 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 DDX1Q92499 740 aaKnown RBP14.18□□□□□ -0.14
MSH6-208ENST00000493177 PCED1BQ96HM7 432 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 ZNF830Q96NB3 372 aaPredicted RBP14.18□□□□□ -0.14
MSH6-208ENST00000493177 ZSWIM1Q9BR11 485 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 B3GNT5Q9BYG0 378 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 KCNH6Q9H252 994 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 ABI2Q9NYB9 513 aaPredicted RBP14.18□□□□□ -0.14
MSH6-208ENST00000493177 CA14Q9ULX7 337 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.18□□□□□ -0.14
MSH6-208ENST00000493177 SLC27A5Q9Y2P5 690 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 PCDHB5Q9Y5E4 795 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 BDP1A6H8Y1 2624 aa14.18□□□□□ -0.14
MSH6-208ENST00000493177 SSU72P8A0A1W2PR75 194 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 MTMR11A4FU01 709 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 AP1G2O75843 785 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 FAM200BP0CF97 657 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 SRFP11831 508 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 CHRNB2P17787 502 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 KIF11P52732 1056 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 SLC8A3P57103 927 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
MSH6-208ENST00000493177 HTR4Q13639 388 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 VEPH1Q14D04 833 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 DENND1BQ6P3S1 775 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 PARM1Q6UWI2 310 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 LCLAT1Q6UWP7 414 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 TRIM72Q6ZMU5 477 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 FAM35AQ86V20 835 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 NPAS3Q8IXF0 933 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 FUKQ8N0W3 1084 aa14.17□□□□□ -0.14
MSH6-208ENST00000493177 SIX5Q8N196 739 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms