RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ZNF132P52740 706 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 BCAT1P54687 386 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 KCNMA1Q12791 1236 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 TXNDC8Q6A555 127 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 MON1AQ86VX9 555 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 ARID3BQ8IVW6 561 aaPredicted RBP13.51□□□□□ -0.25
CLIP2-209ENST00000493166 ANKRD52Q8NB46 1076 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 PDZD8Q8NEN9 1154 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 E2F7Q96AV8 911 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 LSM14BQ9BX40 385 aaKnown RBP13.51□□□□□ -0.25
CLIP2-209ENST00000493166 SLC46A2Q9BY10 475 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 FBXO44Q9H4M3 255 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 TRPV4Q9HBA0 871 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 COMMD8Q9NX08 183 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 DNAJC12Q9UKB3 198 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 CNTN6Q9UQ52 1028 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 MIA3Q5JRA6 1907 aa13.51□□□□□ -0.25
CLIP2-209ENST00000493166 SOBPA7XYQ1 873 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 LGALS16A8MUM7 142 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 HEPACAM2A8MVW5 462 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 HHLA1C9JL84 531 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 O00370 1275 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 DPYSL4O14531 572 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 NARSO43776 548 aaKnown RBP13.5□□□□□ -0.25
CLIP2-209ENST00000493166 CAVIN2O95810 425 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 CALCAP01258 141 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 ATP1A3P13637 1013 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 RFX1P22670 979 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 BRD2P25440 801 aaKnown RBP13.5□□□□□ -0.25
CLIP2-209ENST00000493166 WEE1P30291 646 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 PDE6CP51160 858 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 SIGLEC14Q08ET2 396 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 BST2Q10589 180 aaKnown RBP13.5□□□□□ -0.25
CLIP2-209ENST00000493166 RAPGEF1Q13905 1077 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 IQCB1Q15051 598 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 STILQ15468 1287 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 VITQ6UXI7 678 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 GPRIN1Q7Z2K8 1008 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 TTC30AQ86WT1 665 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 CMTM8Q8IZV2 173 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 OVCA2Q8WZ82 227 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 TFAP2BQ92481 460 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 SHC3Q92529 594 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 PLA2G2FQ9BZM2 168 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 IL37Q9NZH6 218 aa13.5□□□□□ -0.25
CLIP2-209ENST00000493166 AJAP1Q9UKB5 411 aaPredicted RBP13.5□□□□□ -0.25
CLIP2-209ENST00000493166 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLIP2-209ENST00000493166 NCANO14594 1321 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 C2orf78A6NCI8 922 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 ZNF840PA6NDX5 716 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 M0QYV0 167 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 PRAMEF12O95522 483 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 CKMP06732 381 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 CFHP08603 1231 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 USP17L7P0C7H9 530 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 GNA15P30679 374 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 TPM4P67936 248 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 UBXN1Q04323 297 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 GRM2Q14416 872 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 KLHDC7AQ5VTJ3 777 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 DPY19L2P1Q6NXN4 242 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 LCLAT1Q6UWP7 414 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 TRIM67Q6ZTA4 783 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 ARL14EPQ8N8R7 260 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-209ENST00000493166 UBA3Q8TBC4 463 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 DEPDC1BQ8WUY9 529 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 PCMTD1Q96MG8 357 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-209ENST00000493166 TRMT61BQ9BVS5 477 aaKnown RBP13.49□□□□□ -0.25
CLIP2-209ENST00000493166 C1QTNF1Q9BXJ1 281 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 SMG9Q9H0W8 520 aaKnown RBP13.49□□□□□ -0.25
CLIP2-209ENST00000493166 CBX8Q9HC52 389 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 PLCB1Q9NQ66 1216 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 GMIPQ9P107 970 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 FBXL21Q9UKT6 434 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 FHOD1Q9Y613 1164 aa13.49□□□□□ -0.25
CLIP2-209ENST00000493166 FAM92AA1XBS5 289 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 FAM86C2PA6NEL3 165 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 TMEM221A6NGB7 291 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 LRRC10BA6NIK2 292 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 M0R296 226 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 XPO1O14980 1071 aaKnown RBP13.48□□□□□ -0.25
CLIP2-209ENST00000493166 CYP26A1O43174 497 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 THAP12O43422 761 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 MED7O43513 233 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 SETSIPP0DME0 302 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 UCHL3P15374 230 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 PFKLP17858 780 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 PSMC3P17980 439 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 HDCP19113 662 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 KLK7P49862 253 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 KIF11P52732 1056 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 GPC5P78333 572 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 PDE4CQ08493 712 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 CNGA2Q16280 664 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 APTXQ7Z2E3 356 aaKnown RBP13.48□□□□□ -0.25
CLIP2-209ENST00000493166 LUZP1Q86V48 1076 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 PIGZQ86VD9 579 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 MFSD6LQ8IWD5 586 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 YAF2Q8IY57 180 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms