RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 HNRNPLP14866 589 aaKnown RBP eCLIP11.75□□□□□ -0.53
SND1-215ENST00000492772 BDNFP23560 247 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 RDXP35241 583 aaKnown RBP11.75□□□□□ -0.53
SND1-215ENST00000492772 TIE1P35590 1138 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 GRIA2P42262 883 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 PTGER3P43115 390 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 TNFRSF4P43489 277 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 ATXN3P54252 364 aaPredicted RBP11.75□□□□□ -0.53
SND1-215ENST00000492772 NOP14P78316 857 aaKnown RBP11.75□□□□□ -0.53
SND1-215ENST00000492772 SIM1P81133 766 aaPredicted RBP11.75□□□□□ -0.53
SND1-215ENST00000492772 ZXDBP98169 803 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 CYP27A1Q02318 531 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 GRIN1Q05586 938 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 KCNA1Q09470 495 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 SEMA3BQ13214 749 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 TRMT11Q7Z4G4 463 aaKnown RBP11.75□□□□□ -0.53
SND1-215ENST00000492772 LIMS2Q7Z4I7 341 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 PIP4P1Q86T03 277 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 TMEFF1Q8IYR6 380 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 ADGRG2Q8IZP9 1017 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 HDDC3Q8N4P3 179 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 ZSWIM2Q8NEG5 633 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 CEP76Q8TAP6 659 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 KBTBD7Q8WVZ9 684 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 HMGB4Q8WW32 186 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 RLN3Q8WXF3 142 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 PDE11AQ9HCR9 933 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 CRTAC1Q9NQ79 661 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 ARHGEF4Q9NR80 690 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 PPP4R2Q9NY27 417 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 TBC1D14Q9P2M4 693 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 CCDC39Q9UFE4 941 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 CEP192Q8TEP8 1941 aa11.75□□□□□ -0.53
SND1-215ENST00000492772 ANKRD11Q6UB99 2663 aaPredicted RBP11.74□□□□□ -0.53
SND1-215ENST00000492772 NBEAQ8NFP9 2946 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 PCDH15Q96QU1 1955 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 DMXL2Q8TDJ6 3036 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 A0A0A0MRY4 1105 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 TCRBV21S2A2A0A5A6 115 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 GOLGA8IPA6NC78 632 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 GOLGA8JA6NMD2 632 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 ATP2C2O75185 946 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 TNNC2P02585 160 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 CFIP05156 583 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
SND1-215ENST00000492772 WARSP23381 471 aaKnown RBP11.74□□□□□ -0.53
SND1-215ENST00000492772 TXLNAP40222 546 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 KIR2DL1P43626 348 aaPredicted RBP11.74□□□□□ -0.53
SND1-215ENST00000492772 USP46P62068 366 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 KDSRQ06136 332 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 RABEP1Q15276 862 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 SURF1Q15526 300 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 DUOXA1Q1HG43 343 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 MAP7D1Q3KQU3 841 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 PREPLQ4J6C6 727 aaPredicted RBP11.74□□□□□ -0.53
SND1-215ENST00000492772 SLC36A4Q6YBV0 504 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 PGBD3Q8N328 593 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 GPD1LQ8N335 351 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 MYCBPAPQ8TBZ2 947 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 NOC3LQ8WTT2 800 aaKnown RBP11.74□□□□□ -0.53
SND1-215ENST00000492772 OTUB2Q96DC9 234 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 PCED1BQ96HM7 432 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 HPDLQ96IR7 371 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 FAM84AQ96KN4 292 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 C8orf48Q96LL4 319 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 SLITRK1Q96PX8 696 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 CBWD1Q9BRT8 395 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 TMEM74BQ9NUR3 256 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 INTS13Q9NVM9 706 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 SMPD4Q9NXE4 827 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 TBC1D7Q9P0N9 293 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 CFAP97Q9P2B7 532 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 MBD1Q9UIS9 605 aaPredicted RBP11.74□□□□□ -0.53
SND1-215ENST00000492772 PILRBQ9UKJ0 227 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 KLK13Q9UKR3 277 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 LHX6Q9UPM6 363 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 ATXN2Q99700 1313 aaKnown RBP11.74□□□□□ -0.53
SND1-215ENST00000492772 PI4KAP42356 2102 aa11.74□□□□□ -0.53
SND1-215ENST00000492772 SPAARA0A1B0GVQ0 90 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 E2F8A0AVK6 867 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 ANTXRLA6NF34 631 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 F8VP50 259 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 OPHN1O60890 802 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 ADAM23O75077 832 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 SERPINF2P08697 491 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 MBL2P11226 248 aaPredicted RBP11.73□□□□□ -0.53
SND1-215ENST00000492772 ITPKAP23677 461 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 LMO2P25791 158 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 SLC6A11P48066 632 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 CASP5P51878 434 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 RPL6Q02878 288 aaKnown RBP11.73□□□□□ -0.53
SND1-215ENST00000492772 GFPT1Q06210 699 aaPredicted RBP11.73□□□□□ -0.53
SND1-215ENST00000492772 RING1Q06587 406 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 HNRNPDQ14103 355 aaKnown RBP11.73□□□□□ -0.53
SND1-215ENST00000492772 SF3A1Q15459 793 aaKnown RBP11.73□□□□□ -0.53
SND1-215ENST00000492772 TDRD10Q5VZ19 366 aaKnown RBP11.73□□□□□ -0.53
SND1-215ENST00000492772 RHBDF2Q6PJF5 856 aa11.73□□□□□ -0.53
SND1-215ENST00000492772 LRSAM1Q6UWE0 723 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms