RNA–Protein interactions for RNA: ENST00000492719.5

GAPDH-209, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 3

Gene GAPDH, Length 930 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-209ENST00000492719 MYRFLQ96LU7 910 aa14.37□□□□□ -0.11
GAPDH-209ENST00000492719 SEPT5Q99719 369 aaPredicted RBP14.37□□□□□ -0.11
GAPDH-209ENST00000492719 PCIF1Q9H4Z3 704 aa14.37□□□□□ -0.11
GAPDH-209ENST00000492719 KIAA1586Q9HCI6 787 aa14.37□□□□□ -0.11
GAPDH-209ENST00000492719 INTS13Q9NVM9 706 aa14.37□□□□□ -0.11
GAPDH-209ENST00000492719 MGAQ8IWI9 3026 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 ZNF638Q14966 1978 aaKnown RBP14.36□□□□□ -0.11
GAPDH-209ENST00000492719 ATMQ13315 3056 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 ZNF233A6NK53 670 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 HUS1O60921 280 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 PRAMEF12O95522 483 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 FAM163BP0C2L3 166 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 DDX6P26196 483 aaKnown RBP eCLIP14.36□□□□□ -0.11
GAPDH-209ENST00000492719 ITPKBP27987 946 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 LHX1P48742 406 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 NLRP12P59046 1061 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 PLCB2Q00722 1185 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 GRSF1Q12849 480 aaKnown RBP eCLIP14.36□□□□□ -0.111e-8■■■□□ 16.7
GAPDH-209ENST00000492719 SURF1Q15526 300 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 SOWAHAQ2M3V2 549 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 CFAP221Q4G0U5 840 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 USP39Q53GS9 565 aaKnown RBP14.36□□□□□ -0.11
GAPDH-209ENST00000492719 TMEM196Q5HYL7 178 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 INTS6LQ5JSJ4 861 aaKnown RBP14.36□□□□□ -0.11
GAPDH-209ENST00000492719 ATL3Q6DD88 541 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 CMTM8Q8IZV2 173 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 RPLP0P6Q8NHW5 317 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 HPS3Q969F9 1004 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 FAM83CQ9BQN1 747 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 MAGEF1Q9HAY2 307 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 TMEM74BQ9NUR3 256 aa14.36□□□□□ -0.11
GAPDH-209ENST00000492719 DDX43Q9NXZ2 648 aaKnown RBP14.36□□□□□ -0.11
GAPDH-209ENST00000492719 CAPN9O14815 690 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 OPHN1O60890 802 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 TSPY1Q01534 308 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 DMC1Q14565 340 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 DUOXA2Q1HG44 320 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 C11orf74Q86VG3 221 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 OSTM1Q86WC4 334 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 CBWD2Q8IUF1 395 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 OR5B17Q8NGF7 314 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 BPIFB1Q8TDL5 484 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 GIPC2Q8TF65 315 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 TMEM174Q8WUU8 243 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 TRMT2BQ96GJ1 504 aaKnown RBP14.35□□□□□ -0.11
GAPDH-209ENST00000492719 FUBP3Q96I24 572 aaKnown RBP eCLIP14.35□□□□□ -0.11
GAPDH-209ENST00000492719 FAM84AQ96KN4 292 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 MTMR12Q9C0I1 747 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 ABI2Q9NYB9 513 aaPredicted RBP14.35□□□□□ -0.11
GAPDH-209ENST00000492719 HSPBP1Q9NZL4 362 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 DKK4Q9UBT3 224 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 EBF1Q9UH73 591 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 CIZ1Q9ULV3 898 aaPredicted RBP14.35□□□□□ -0.11
GAPDH-209ENST00000492719 ANKRD17O75179 2603 aaKnown RBP14.35□□□□□ -0.11
GAPDH-209ENST00000492719 PTPRJQ12913 1337 aa14.35□□□□□ -0.11
GAPDH-209ENST00000492719 HELZP42694 1942 aaKnown RBP14.35□□□□□ -0.11
GAPDH-209ENST00000492719 PVALEFA0A1B0GWK0 134 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 DPYSL4O14531 572 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 SH3BP5O60239 455 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 NOL4O94818 638 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 CSH1P0DML2 217 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 CSH2P0DML3 217 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 ZSCAN22P10073 491 aaPredicted RBP14.34□□□□□ -0.11
GAPDH-209ENST00000492719 CD59P13987 128 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 MAGEA11P43364 429 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 RPL10AP62906 217 aaKnown RBP14.34□□□□□ -0.11
GAPDH-209ENST00000492719 CYP4F8P98187 520 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 MYL7Q01449 175 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 ZNF268Q14587 947 aaPredicted RBP14.34□□□□□ -0.11
GAPDH-209ENST00000492719 BMT2Q1RMZ1 405 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 ITPRIPL2Q3MIP1 535 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 UNC13DQ70J99 1090 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 MON1AQ86VX9 555 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 WDR49Q8IV35 697 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 C12orf56Q8IXR9 622 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 TSTD1Q8NFU3 115 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 KBTBD7Q8WVZ9 684 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 DHX58Q96C10 678 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 CEP295NLQ96MC4 621 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 PI4K2AQ9BTU6 479 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 PRORYQ9H606 182 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 AGPAT3Q9NRZ7 376 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 RCOR1Q9UKL0 485 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 GTF3C4Q9UKN8 822 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 PCDHA7Q9UN72 937 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 PCDHB9Q9Y5E1 797 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 SNX9Q9Y5X1 595 aa14.34□□□□□ -0.11
GAPDH-209ENST00000492719 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 PRPF40AO75400 957 aaKnown RBP14.33□□□□□ -0.12
GAPDH-209ENST00000492719 F13A1P00488 732 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 TMEM191BP0C7N4 346 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 CYP2F1P24903 491 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 PCSK1P29120 753 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 PTGER3P43115 390 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 GPR15P49685 360 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 CDR1P51861 262 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 BFSP1Q12934 665 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 MYO1EQ12965 1108 aa14.33□□□□□ -0.12
GAPDH-209ENST00000492719 HNRNPDQ14103 355 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms