RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 KCNK16Q96T55 309 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 RNF38Q9H0F5 515 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 PARD6AQ9NPB6 346 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.35■□□□□ 0.532e-7■■■■■ 131.8
SGMS1-204ENST00000492601 SMPD4Q9NXE4 827 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 MAPK8IP1Q9UQF2 711 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 FRMD4BQ9Y2L6 1034 aa18.35■□□□□ 0.53
SGMS1-204ENST00000492601 ATP8B3O60423 1300 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 SCAMP3O14828 347 aaKnown RBP18.34■□□□□ 0.53
SGMS1-204ENST00000492601 CALUO43852 315 aaPredicted RBP18.34■□□□□ 0.53
SGMS1-204ENST00000492601 DRD1P21728 446 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 SPEM2Q0P670 501 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 ZACNQ401N2 412 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 ACOT1Q86TX2 421 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 FAM35AQ86V20 835 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 NUP93Q8N1F7 819 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 GPR161Q8N6U8 529 aaKnown RBP18.34■□□□□ 0.53
SGMS1-204ENST00000492601 TMEM174Q8WUU8 243 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 CD101Q93033 1021 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 CCDC47Q96A33 483 aaKnown RBP18.34■□□□□ 0.53
SGMS1-204ENST00000492601 SLITRK1Q96PX8 696 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 GOLPH3LQ9H4A5 285 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 GDPD2Q9HCC8 539 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 SLC8A2Q9UPR5 921 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 NCOR2Q9Y618 2525 aa18.34■□□□□ 0.53
SGMS1-204ENST00000492601 FAM237AA0A1B0GTK4 181 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 ATG13O75143 517 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 TCF3P15923 654 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 PFKLP17858 780 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 TGM1P22735 817 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 YWHAQP27348 245 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 CNR2P34972 360 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 PPP3CCP48454 512 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 SLC7A9P82251 487 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 DPYDQ12882 1025 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 NR1H3Q13133 447 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 PUM1Q14671 1186 aaKnown RBP eCLIP18.33■□□□□ 0.524e-6■■□□□ 14.4
SGMS1-204ENST00000492601 SGSM1Q2NKQ1 1148 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 C1orf220Q5T0J3 134 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 SPOPLQ6IQ16 392 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 KRBA2Q6ZNG9 492 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 PAQR9Q6ZVX9 377 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 CEP68Q76N32 757 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 SV2AQ7L0J3 742 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 DGLUCYQ7Z3D6 616 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.33■□□□□ 0.52
SGMS1-204ENST00000492601 WDR5BQ86VZ2 330 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 ABCA7Q8IZY2 2146 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 TMC2Q8TDI7 906 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 EZH1Q92800 747 aaPredicted RBP18.33■□□□□ 0.52
SGMS1-204ENST00000492601 FBXO32Q969P5 355 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 EXOC4Q96A65 974 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 TNIP3Q96KP6 325 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 SCAND2PQ9GZW5 306 aaPredicted RBP18.33■□□□□ 0.52
SGMS1-204ENST00000492601 HMGXB4Q9UGU5 601 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 TRAF3IP3Q9Y228 551 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 ATP6V1DQ9Y5K8 247 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 CPQQ9Y646 472 aa18.33■□□□□ 0.52
SGMS1-204ENST00000492601 AP1G2O75843 785 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 RHOBTB3O94955 611 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 RTN3O95197 1032 aaPredicted RBP18.32■□□□□ 0.52
SGMS1-204ENST00000492601 KIF20AO95235 890 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 NFATC1O95644 943 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 OAS1P00973 400 aaKnown RBP18.32■□□□□ 0.52
SGMS1-204ENST00000492601 HLA-DRAP01903 254 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 MBL2P11226 248 aaPredicted RBP18.32■□□□□ 0.52
SGMS1-204ENST00000492601 P4HA1P13674 534 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 HOXA6P31267 233 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 PIK3CAP42336 1068 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 FILIP1Q7Z7B0 1213 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 RPLP0P6Q8NHW5 317 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 SCAMP5Q8TAC9 235 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 KRT82Q9NSB4 513 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 CHORDC1Q9UHD1 332 aaPredicted RBP18.32■□□□□ 0.52
SGMS1-204ENST00000492601 NUP205Q92621 2012 aa18.32■□□□□ 0.52
SGMS1-204ENST00000492601 THADAQ6YHU6 1953 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 CNOT1A5YKK6 2376 aaKnown RBP18.31■□□□□ 0.52
SGMS1-204ENST00000492601 A0A1W2PQ27 194 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 A0A1W2PQ64 194 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 A0A1W2PQD8 194 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 IKBKBO14920 756 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 OLFM2O95897 454 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 ASS1P00966 412 aaKnown RBP18.31■□□□□ 0.52
SGMS1-204ENST00000492601 RETP07949 1114 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 TRIM49P0CI25 452 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 TRIM49CP0CI26 452 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 CCDC130P13994 396 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 NR2F2P24468 414 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 VAMP7P51809 220 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 NDST1P52848 882 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 FUKQ8N0W3 1084 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 SMARCD1Q96GM5 515 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 HHIPQ96QV1 700 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 MMRN2Q9H8L6 949 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 DMAP1Q9NPF5 467 aaPredicted RBP18.31■□□□□ 0.52
SGMS1-204ENST00000492601 DLL3Q9NYJ7 618 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 CFAP97Q9P2B7 532 aa18.31■□□□□ 0.52
SGMS1-204ENST00000492601 TNFRSF10BO14763 440 aa18.3■□□□□ 0.52
SGMS1-204ENST00000492601 AKAP3O75969 853 aa18.3■□□□□ 0.52
SGMS1-204ENST00000492601 ZNF202O95125 648 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms