RNA–Protein interactions for RNA: ENST00000492233.5

ATPAF1-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-206ENST00000492233 TRPV4Q9HBA0 871 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 PARVGQ9HBI0 331 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 GDF3Q9NR23 364 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 PAPOLBQ9NRJ5 636 aaKnown RBP4□□□□□ -1.77
ATPAF1-206ENST00000492233 KRT84Q9NSB2 600 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 THG1LQ9NWX6 298 aaKnown RBP4□□□□□ -1.77
ATPAF1-206ENST00000492233 RGL1Q9NZL6 768 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 SAMD15Q9P1V8 674 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 LRFN1Q9P244 771 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 VPS18Q9P253 973 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 DKK3Q9UBP4 350 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 ZNF70Q9UC06 446 aaPredicted RBP4□□□□□ -1.77
ATPAF1-206ENST00000492233 RASAL2Q9UJF2 1139 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 NAGPAQ9UK23 515 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 TMEM59LQ9UK28 342 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 VPS28Q9UK41 221 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 FEM1BQ9UK73 627 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 ITGB1BP2Q9UKP3 347 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 CORO2BQ9UQ03 480 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 KCNH4Q9UQ05 1017 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 POLR3KQ9Y2Y1 108 aaPredicted RBP4□□□□□ -1.77
ATPAF1-206ENST00000492233 CNTNAP1P78357 1384 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 ZMYM2Q9UBW7 1377 aa4□□□□□ -1.77
ATPAF1-206ENST00000492233 MYH8P13535 1937 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 NCANO14594 1321 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 TCRBV16S1A1N1A0A5B0 115 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 H0YC42 278 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 DDX3XO00571 662 aaKnown RBP eCLIP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 CLIC2O15247 247 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 MAPK13O15264 365 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 FFAR2O15552 330 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 HOXC11O43248 304 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 BUB1O43683 1085 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 MAN1A2O60476 641 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 MGEA5O60502 916 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 SHOX2O60902 331 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 FLOT1O75955 427 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 LYPLA2O95372 231 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 GCNT3O95395 438 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 FTCDO95954 541 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 IVLP07476 585 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 H2AFZP0C0S5 128 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 SFTPCP11686 197 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ALAS1P13196 640 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 EDN3P14138 238 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 RPS2P15880 293 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 NMT1P30419 496 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 CHRNA5P30532 468 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 HOXC12P31275 282 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 GGCXP38435 758 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ADH7P40394 386 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 LSSP48449 732 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 LMAN1P49257 510 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 NR1H2P55055 460 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 SESN3P58005 492 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 RNASE9P60153 205 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 SNRPFP62306 86 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 IL1RL1Q01638 556 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 CYP4A11Q02928 519 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 MMRN1Q13201 1228 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ALCAMQ13740 583 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 LRP8Q14114 963 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 CTTNQ14247 550 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 PLS1Q14651 629 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 DLGAP5Q15398 846 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 RPS6KA1Q15418 735 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 TRIP4Q15650 581 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ZSCAN26Q16670 478 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 HSF5Q4G112 596 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 KRTCAP3Q53RY4 240 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 DCAF17Q5H9S7 520 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ALS2CLQ60I27 953 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ZNF772Q68DY9 489 aaPredicted RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 C8orf74Q6P047 294 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 RPUSD3Q6P087 351 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 LEKR1Q6ZMV7 388 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 H2AFVQ71UI9 128 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 KRT74Q7RTS7 529 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 DDX53Q86TM3 631 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 FAM83AQ86UY5 434 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 VPS36Q86VN1 386 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 LDHDQ86WU2 507 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 UNC45BQ8IWX7 931 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 CD302Q8IX05 232 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 IFT20Q8IY31 132 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 GSPT2Q8IYD1 628 aaKnown RBP3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 KIAA0319LQ8IZA0 1049 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 DAW1Q8N136 415 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 KRT78Q8N1N4 520 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ZNF619Q8N2I2 560 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 RASGEF1CQ8N431 466 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ATG16L2Q8NAA4 619 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 SMC1BQ8NDV3 1235 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 AGBL3Q8NEM8 1001 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ZMIZ2Q8NF64 920 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 SCFD2Q8WU76 684 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 HDAC7Q8WUI4 952 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 LMBR1Q8WVP7 490 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 TMEM40Q8WWA1 233 aa3.99□□□□□ -1.77
ATPAF1-206ENST00000492233 ZNF606Q8WXB4 792 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms