RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PRR29P0C7W0 189 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 ID4P47928 161 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 GCLMP48507 274 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 NDST1P52848 882 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 DLG4P78352 724 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 SLC7A9P82251 487 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 FKBP3Q00688 224 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 CETN1Q12798 172 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 CCINQ13939 588 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 ZNF77Q15935 545 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 TMEM196Q5HYL7 178 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 TCERG1LQ5VWI1 586 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 TRIM68Q6AZZ1 485 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 TXNDC11Q6PKC3 985 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 PRR23BQ6ZRT6 265 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 TADA2BQ86TJ2 420 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 ZNF687Q8N1G0 1237 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 NELL1Q92832 810 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 NIF3L1Q9GZT8 377 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 GOLPH3LQ9H4A5 285 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 FAM124BQ9H5Z6 455 aaPredicted RBP17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 HPS4Q9NQG7 708 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 TLR8Q9NR97 1041 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 RBM12Q9NTZ6 932 aaKnown RBP17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 GCNT4Q9P109 453 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 SH3BP1Q9Y3L3 701 aa17.56■□□□□ 0.4
PDLIM2-217ENST00000491330 SHISA7A6NL88 538 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 LEFTY2O00292 366 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 CLDN5O00501 218 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 PSMA7O14818 248 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 LILRB5O75023 590 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 TADA3O75528 432 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 AKAP3O75969 853 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 VNN1O95497 513 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 ADH1CP00326 375 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 ARSAP15289 507 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 HOXA6P31267 233 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 GJA4P35212 333 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 RAP1GAPP47736 663 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 YWHAEP62258 255 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 SATB1Q01826 763 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 USP4Q13107 963 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 SIM2Q14190 667 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 CCDC142Q17RM4 750 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 ZNF658Q5TYW1 1059 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 BTBD8Q5XKL5 378 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 KIAA2013Q8IYS2 634 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 CAMKK1Q8N5S9 505 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 ENGASEQ8NFI3 743 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 PLEKHO2Q8TD55 490 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 OTUB2Q96DC9 234 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 GZF1Q9H116 711 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 KRT82Q9NSB4 513 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 CPQQ9Y646 472 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 WNT6Q9Y6F9 365 aa17.55■□□□□ 0.4
PDLIM2-217ENST00000491330 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 MXI1P50539 228 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 TUBP50607 506 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 GALK1P51570 392 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 SLC5A3P53794 718 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 USP46P62068 366 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 LRRC63Q05C16 580 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 LAIR1Q6GTX8 287 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 SUMF1Q8NBK3 374 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 FBXL13Q8NEE6 735 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 SPATA20Q8TB22 786 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 SLC2A14Q8TDB8 520 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 CYFIP2Q96F07 1278 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 CHAMP1Q96JM3 812 aa17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 METTL14Q9HCE5 456 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 CHORDC1Q9UHD1 332 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-217ENST00000491330 MIA3Q5JRA6 1907 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 CCDC163A0A0D9SF12 145 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 E2F8A0AVK6 867 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 PRR5-ARHGAP8B1AHC4 643 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 SLC16A3O15427 465 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 ARHGAP8P85298 464 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 PNOCQ13519 176 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 EML3Q32P44 896 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 HEATR6Q6AI08 1181 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 SLC22A12Q96S37 553 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 CDK5RAP1Q96SZ6 601 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 KCNK16Q96T55 309 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 SMPD4Q9NXE4 827 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 CFAP97Q9P2B7 532 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 LSM7Q9UK45 103 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 USP18Q9UMW8 372 aa17.53■□□□□ 0.4
PDLIM2-217ENST00000491330 PTPRZ1P23471 2315 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 CHURC1-FNTBB4DL54 471 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 RNF40O75150 1001 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 TRIM49P0CI25 452 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 TRIM49CP0CI26 452 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 CCDC192P0DO97 292 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 CD58P19256 250 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 ADORA2BP29275 332 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 ATP5C1P36542 298 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 FNTBP49356 437 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 PSEN1P49768 467 aa17.52■□□□□ 0.4
PDLIM2-217ENST00000491330 MAP3K7CLP57077 242 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms