RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 SPATA31A3Q5VYP0 1347 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 RPS6P62753 249 aaKnown RBP11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 NCOA4Q13772 614 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ABCB5Q2M3G0 1257 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 OR6B2Q6IFH4 312 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 FBXO33Q7Z6M2 555 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 DCLK2Q8N568 766 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 RNF148Q8N7C7 305 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 PIWIL2Q8TC59 973 aaKnown RBP11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 KAT5Q92993 513 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 CSRNP1Q96S65 589 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ADNPQ9H2P0 1102 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ACP6Q9NPH0 428 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 SLC7A8Q9UHI5 535 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 RABGEF1Q9UJ41 708 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 KBTBD13C9JR72 458 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 CFAP99D6REC4 459 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ADAMTS3O15072 1205 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 BCL10O95999 233 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 P4HBP07237 508 aaKnown RBP11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 PABPC4LP0CB38 370 aaKnown RBP11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ETS1P14921 441 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ATP2B4P23634 1241 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 KPNA2P52292 529 aaKnown RBP11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 TDRPQ86YL5 185 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 GPD1LQ8N335 351 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 DHX38Q92620 1227 aaKnown RBP11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 BORCS5Q969J3 196 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 ATXN7L3BQ96GX2 97 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 COX4I2Q96KJ9 171 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 TXLNGYQ9BZA5 131 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 AVENQ9NQS1 362 aaPredicted RBP11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 TTLL3Q9Y4R7 772 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
CRNKL1-204ENST00000490910 TRAFD1O14545 582 aaPredicted RBP11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 GNPATO15228 680 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 OATP04181 439 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 STIP1P31948 543 aaKnown RBP11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 POU5F1Q01860 360 aaKnown RBP11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 ECM1Q16610 540 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 NRF1Q16656 503 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 WDR72Q3MJ13 1102 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 MFSD7Q6UXD7 560 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 EFCAB3Q8N7B9 438 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 HAS1Q92839 578 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 APBB2Q92870 758 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 USP13Q92995 863 aaPredicted RBP11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 CDRT15Q96T59 188 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 ADPGKQ9BRR6 497 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 C12orf65Q9H3J6 166 aaKnown RBP11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 PICK1Q9NRD5 415 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 PSMD13Q9UNM6 376 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 SSX2IPQ9Y2D8 614 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 P4HA1P13674 534 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 GYS1P13807 737 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 S100A1P23297 94 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 SLC1A6P48664 564 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 ITGADQ13349 1161 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 MYBPC2Q14324 1141 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 KIF19Q2TAC6 998 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 TMEM63BQ5T3F8 832 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 ITPRIPL1Q6GPH6 555 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 PACS1Q6VY07 963 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 TNIP2Q8NFZ5 429 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 FAM172AQ8WUF8 416 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 UTP4Q969X6 686 aaKnown RBP11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 SLAIN2Q9P270 581 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 ORC6Q9Y5N6 252 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 CASZ1Q86V15 1759 aa11.71□□□□□ -0.53
CRNKL1-204ENST00000490910 MAGEB2O15479 319 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 MUTP22033 750 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 ME2P23368 584 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 GLRA2P23416 452 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 MOXD1Q6UVY6 613 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 MCUQ8NE86 351 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 CNDP1Q96KN2 507 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 FHDC1Q9C0D6 1143 aaPredicted RBP11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 PPM1HQ9ULR3 514 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 C16orf96A6NNT2 1141 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 M0R3G1 203 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 MSH4O15457 936 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 BANF1O75531 89 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 RALBP11234 206 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 QARSP47897 775 aaKnown RBP11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 MGAT5Q09328 741 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 IFRD2Q12894 506 aaPredicted RBP11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 PTK2BQ14289 1009 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 NADK2Q4G0N4 442 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 KLHDC10Q6PID8 442 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 ADCK1Q86TW2 530 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 KATNAL2Q8IYT4 538 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 PACSIN3Q9UKS6 424 aa11.71□□□□□ -0.54
CRNKL1-204ENST00000490910 TPST1O60507 370 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 ALOX15P16050 662 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 CASP2P42575 452 aa11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 HADHBP55084 474 aaKnown RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 SESN2P58004 480 aaPredicted RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 TFAMQ00059 246 aaKnown RBP11.7□□□□□ -0.54
CRNKL1-204ENST00000490910 IL1RL1Q01638 556 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms