RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TMX4Q9H1E5 349 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 NOD2Q9HC29 1040 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 XAB2Q9HCS7 855 aaKnown RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 TAS2R10Q9NYW0 307 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 CFDP1Q9UEE9 299 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 ZMYND8Q9ULU4 1186 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 IQGAP3Q86VI3 1631 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 CYP3A7-CYP3A51PA0A087WV96 503 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 PIK3R2O00459 728 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 TRIM38O00635 465 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 CAPN9O14815 690 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 FMO6PO60774 539 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 FSBPO95073 299 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 LARGE1O95461 756 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 GSPT1P15170 499 aaKnown RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 CYP3A7P24462 503 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 ATP5DP30049 168 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 MAPKAPK2P49137 400 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 TERF1P54274 439 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 HGFACQ04756 655 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 PSMD6Q15008 389 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 RABEP1Q15276 862 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 CCDC92Q53HC0 331 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 DAB2IPQ5VWQ8 1189 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 TAF2Q6P1X5 1199 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 DRICH1Q6PGQ1 229 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 CYP20A1Q6UW02 462 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 LRSAM1Q6UWE0 723 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 SZRD1Q7Z422 152 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 ERC1Q8IUD2 1116 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 ARMC8Q8IUR7 673 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 FAM133AQ8N9E0 248 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 PDZD8Q8NEN9 1154 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 FNIP1Q8TF40 1166 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 XAGE3Q8WTP9 111 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 OVCA2Q8WZ82 227 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 LENG9Q96B70 501 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 CTHRC1Q96CG8 243 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 PERPQ96FX8 193 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 PEX11GQ96HA9 241 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 KAZALD1Q96I82 304 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 SLF1Q9BQI6 1058 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 FSCN3Q9NQT6 498 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 DLL4Q9NR61 685 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 XPO7Q9UIA9 1087 aaKnown RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 VPS28Q9UK41 221 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 DNAJC16Q9Y2G8 782 aa3.29□□□□□ -1.88
UBXN4-208ENST00000490163 MTF2Q9Y483 593 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 SPAG9O60271 1321 aaKnown RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 TROQ12816 1431 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-208ENST00000490163 FITM1A5D6W6 292 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 NPIPB15A6NHN6 443 aaPredicted RBP3.28□□□□□ -1.88
UBXN4-208ENST00000490163 TEX22C9J3V5 150 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 DCLK1O15075 740 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 TNFRSF6BO95407 300 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 IL2RBP14784 551 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 KRT15P19012 456 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 SCP2P22307 547 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 GPD2P43304 727 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 NPTX2P47972 431 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 ADAM17P78536 824 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 KIAA2012Q0VF49 1180 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 TUBB3Q13509 450 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 PMS2CLQ68D20 193 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 PLEKHA7Q6IQ23 1121 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 GALNT13Q8IUC8 556 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 ARRDC4Q8NCT1 418 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 FBLIM1Q8WUP2 373 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 ASCC2Q9H1I8 757 aaPredicted RBP3.28□□□□□ -1.88
UBXN4-208ENST00000490163 PNPLA3Q9NST1 481 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 VSX1Q9NZR4 365 aaPredicted RBP3.28□□□□□ -1.88
UBXN4-208ENST00000490163 GULP1Q9UBP9 304 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 PIAS3Q9Y6X2 628 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 HECW2Q9P2P5 1572 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 PRAMEF22A3QJZ6 481 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 ZAR1LA6NP61 321 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 MTHFD1P11586 935 aaKnown RBP3.28□□□□□ -1.88
UBXN4-208ENST00000490163 SCAPQ12770 1279 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 ANKRD1Q15327 319 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 TBR1Q16650 682 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 BMT2Q1RMZ1 405 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 GALNTL6Q49A17 601 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 PRAMEF18Q5VWM3 479 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 RNF43Q68DV7 783 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 NAIF1Q69YI7 327 aaPredicted RBP3.28□□□□□ -1.88
UBXN4-208ENST00000490163 CALML6Q8TD86 181 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 SH3RF3Q8TEJ3 882 aaPredicted RBP3.28□□□□□ -1.88
UBXN4-208ENST00000490163 SLC16A10Q8TF71 515 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 DUSP19Q8WTR2 217 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 LRRC59Q96AG4 307 aaKnown RBP3.28□□□□□ -1.88
UBXN4-208ENST00000490163 CEP95Q96GE4 821 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 MFSD14AQ96MC6 490 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 KCNJ15Q99712 375 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 SUCLA2Q9P2R7 463 aaPredicted RBP3.28□□□□□ -1.88
UBXN4-208ENST00000490163 PNPLA7Q6ZV29 1317 aa3.28□□□□□ -1.88
UBXN4-208ENST00000490163 LIPT2A6NK58 231 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 AQP7P3A6NL99 342 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 EFCAB8A8MWE9 144 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 ANP32CO43423 234 aa3.28□□□□□ -1.89
UBXN4-208ENST00000490163 ACTL6BO94805 426 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms