RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CSF1RP07333 972 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SRGAP2CP0DJJ0 459 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SRGAP2BP0DMP2 458 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 RBP3P10745 1247 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 KRT4P19013 534 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CA4P22748 312 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 NOS2P35228 1153 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PIK3CAP42336 1068 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HSPA13P48723 471 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HNRNPFP52597 415 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HIRAP54198 1017 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 MYBPC1Q00872 1141 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 MECOMQ03112 1051 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TCEAL1Q15170 157 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TMED2Q15363 201 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SEC23AQ15436 765 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TRIP10Q15642 601 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 KCNJ8Q15842 424 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 MOGQ16653 247 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 LRRC36Q1X8D7 754 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ALG1LQ6GMV1 187 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TPTE2Q6XPS3 522 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 RNF111Q6ZNA4 994 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FRA10AC1Q70Z53 315 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 LPCAT2Q7L5N7 544 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CATIPQ7Z7H3 387 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TMCO5AQ8N6Q1 288 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 VGLL2Q8N8G2 317 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC43A3Q8NBI5 491 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PCYOX1LQ8NBM8 494 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 BBOF1Q8ND07 529 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CATSPER1Q8NEC5 780 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CALML6Q8TD86 181 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 LRRC15Q8TF66 581 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ALG3Q92685 438 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SNF8Q96H20 258 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CRELD1Q96HD1 420 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 OXNAD1Q96HP4 312 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF512BQ96KM6 892 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CFAP57Q96MR6 1250 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 PRPF18Q99633 342 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TMEM120AQ9BXJ8 343 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 TDRD1Q9BXT4 1180 aaKnown RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 NUF2Q9BZD4 464 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 IMPG2Q9BZV3 1241 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CEP44Q9C0F1 390 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SH3GLB2Q9NR46 395 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 C6orf203Q9P0P8 240 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CRNNQ9UBG3 495 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FOXD3Q9UJU5 478 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ANAPC5Q9UJX4 755 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FBXO9Q9UK97 447 aaPredicted RBP4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 HDAC9Q9UKV0 1011 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SCINQ9Y6U3 715 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 SPATA31A6Q5VVP1 1343 aa4.96□□□□□ -1.61
SNRNP40-206ENST00000489853 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.96□□□□□ -1.61
SNRNP40-206ENST00000489853 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 LOC105371267A0A1B0GV96 52 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 DYTNA2CJ06 578 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 H3BRJ5 948 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 AXIN1O15169 862 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 SIN3BO75182 1162 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 MTRF1O75570 445 aaKnown RBP4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 STAM2O75886 525 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 KRT75O95678 551 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 C8BP07358 591 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 DLDP09622 509 aaKnown RBP4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 TFPTP0C1Z6 253 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 C6orf222P0C671 652 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 SCG2P13521 617 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 UCHL3P15374 230 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 TATP17735 454 aaPredicted RBP4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 IVDP26440 423 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 PON1P27169 355 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 PEX2P28328 305 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 MAN1A1P33908 653 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 CHKAP35790 457 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 ALDH1A3P47895 512 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 GPC3P51654 580 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 ARL4CP56559 192 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 BTKQ06187 659 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 CDK18Q07002 472 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 SCARF1Q14162 830 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 PSMD6Q15008 389 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 SUZ12Q15022 739 aaKnown RBP4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 RGS21Q2M5E4 152 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 CCDC14Q49A88 953 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 LRRC24Q50LG9 513 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 PARP10Q53GL7 1025 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 ARSHQ5FYA8 562 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 WDR45BQ5MNZ6 344 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 SEL1L2Q5TEA6 688 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 EGFLAMQ63HQ2 1017 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 NANOGP8Q6NSW7 305 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 C11orf63Q6NUN7 778 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 LVRNQ6Q4G3 990 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 ANKS1BQ7Z6G8 1248 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 NOP9Q86U38 636 aaKnown RBP4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 MCF2L2Q86YR7 1114 aa4.96□□□□□ -1.62
SNRNP40-206ENST00000489853 SLC13A5Q86YT5 568 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms