RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 HCFC1R1Q9NWW0 138 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 USP3Q9Y6I4 520 aa16.98■□□□□ 0.31
CLIC4-203ENST00000489758 REV3LO60673 3130 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 FAM92AA1XBS5 289 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 SPDYE4A6NLX3 237 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 XYLBO75191 536 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 CSH1P0DML2 217 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 CSH2P0DML3 217 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 TNFAIP3P21580 790 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 EIF4A3P38919 411 aaKnown RBP16.97■□□□□ 0.31
CLIC4-203ENST00000489758 RGS7P49802 495 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 EPHA5P54756 1037 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 TSR1Q2NL82 804 aaKnown RBP16.97■□□□□ 0.31
CLIC4-203ENST00000489758 ASTE1Q2TB18 679 aaPredicted RBP16.97■□□□□ 0.31
CLIC4-203ENST00000489758 NAA35Q5VZE5 725 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 CYP26C1Q6V0L0 522 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 TMEM110Q86TL2 294 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 ITIH5Q86UX2 942 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 HS6ST3Q8IZP7 471 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 CPA5Q8WXQ8 436 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 HSFY1Q96LI6 401 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 CPXM1Q96SM3 734 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 APOL5Q9BWW9 433 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 ADAM7Q9H2U9 754 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 UBE2ZQ9H832 354 aaPredicted RBP16.97■□□□□ 0.31
CLIC4-203ENST00000489758 DNMT3BQ9UBC3 853 aaKnown RBP16.97■□□□□ 0.31
CLIC4-203ENST00000489758 TJP2Q9UDY2 1190 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 CDH22Q9UJ99 828 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 NENFQ9UMX5 172 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 CEP83Q9Y592 693 aa16.97■□□□□ 0.31
CLIC4-203ENST00000489758 PRRC2BQ5JSZ5 2229 aaKnown RBP16.97■□□□□ 0.31
CLIC4-203ENST00000489758 A0A087X0T9 212 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 SSU72P8A0A1W2PR75 194 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 NRG2O14511 850 aaPredicted RBP16.96■□□□□ 0.31
CLIC4-203ENST00000489758 FAM228BP0C875 321 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 TKTL1P51854 596 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 GSDMDP57764 484 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 CENPCQ03188 943 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 PTPN20Q4JDL3 420 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 EP400NLQ6ZTU2 488 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 CCDC186Q7Z3E2 898 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 TMEM150AQ86TG1 271 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 TMEM139Q8IV31 216 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 ELMOD1Q8N336 334 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 SMRP1Q8NCR6 262 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 SMG7Q92540 1137 aaKnown RBP16.96■□□□□ 0.31
CLIC4-203ENST00000489758 PPP1R13BQ96KQ4 1090 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 ZNF512Q96ME7 567 aaPredicted RBP16.96■□□□□ 0.31
CLIC4-203ENST00000489758 IL21Q9HBE4 155 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 CYLDQ9NQC7 956 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 SEPT11Q9NVA2 429 aaKnown RBP16.96■□□□□ 0.31
CLIC4-203ENST00000489758 COMMD8Q9NX08 183 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 TAS2R14Q9NYV8 317 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 ADAMTS1Q9UHI8 967 aa16.96■□□□□ 0.31
CLIC4-203ENST00000489758 FAM170AA1A519 330 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 E5RJQ4 531 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 PIK3R2O00459 728 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 RTN3O95197 1032 aaPredicted RBP16.95■□□□□ 0.3
CLIC4-203ENST00000489758 ERBB2P04626 1255 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 RHOP08100 348 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 PTPN2P17706 415 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 MMP8P22894 467 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 GABRB2P47870 512 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 NTHL1P78549 312 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 ITIH3Q06033 890 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 ADIGQ0VDE8 80 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 SKIV2LQ15477 1246 aaKnown RBP16.95■□□□□ 0.3
CLIC4-203ENST00000489758 PM20D1Q6GTS8 502 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 BHLHA9Q7RTU4 235 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 GRASPQ7Z6J2 395 aaPredicted RBP16.95■□□□□ 0.3
CLIC4-203ENST00000489758 PHF13Q86YI8 300 aaPredicted RBP16.95■□□□□ 0.3
CLIC4-203ENST00000489758 SCML4Q8N228 414 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 ANP32BQ92688 251 aaKnown RBP16.95■□□□□ 0.3
CLIC4-203ENST00000489758 CORO1BQ9BR76 489 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 NHEJ1Q9H9Q4 299 aaPredicted RBP16.95■□□□□ 0.3
CLIC4-203ENST00000489758 LRRC4Q9HBW1 653 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 AVENQ9NQS1 362 aaPredicted RBP16.95■□□□□ 0.3
CLIC4-203ENST00000489758 CD207Q9UJ71 328 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 MAGED2Q9UNF1 606 aaPredicted RBP16.95■□□□□ 0.3
CLIC4-203ENST00000489758 SCML2Q9UQR0 700 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 PTPRDP23468 1912 aa16.95■□□□□ 0.3
CLIC4-203ENST00000489758 MYO7AQ13402 2215 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 H3BQ06 376 aaPredicted RBP16.94■□□□□ 0.3
CLIC4-203ENST00000489758 PAPSS1O43252 624 aaPredicted RBP16.94■□□□□ 0.3
CLIC4-203ENST00000489758 TADA3O75528 432 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 F11P03951 625 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 LCP1P13796 627 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 KCNA5P22460 613 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 YWHAQP27348 245 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 CCR2P41597 374 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 ACADSBP45954 432 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 PGFP49763 221 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 IFRD2Q12894 506 aaPredicted RBP16.94■□□□□ 0.3
CLIC4-203ENST00000489758 TAF10Q12962 218 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 PTP4A2Q12974 167 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 CLUL1Q15846 466 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 SLC5A9Q2M3M2 681 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 PRSS36Q5K4E3 855 aa16.94■□□□□ 0.3
CLIC4-203ENST00000489758 ACAD10Q6JQN1 1059 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms