RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 CTXN3Q4LDR2 81 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 CEP55Q53EZ4 464 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 LACTB2Q53H82 288 aaPredicted RBP8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 MANEAQ5SRI9 462 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 PPP1R15BQ5SWA1 713 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 C14orf80Q86SX3 495 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 TMEM150AQ86TG1 271 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 ITIH5Q86UX2 942 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 VASH2Q86V25 355 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 XYLT1Q86Y38 959 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 MIB1Q86YT6 1006 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 SMAP1Q8IYB5 467 aaPredicted RBP8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 CPT1CQ8TCG5 803 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 GRAMD1AQ96CP6 724 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 ATXN7L3BQ96GX2 97 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 CPB2Q96IY4 423 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 GCNAQ96QF7 691 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 LNPKQ9C0E8 428 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 CXCL16Q9H2A7 254 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 LINC00597Q9H2U6 94 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 PPM1HQ9ULR3 514 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 STARD13Q9Y3M8 1113 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 PCDHA10Q9Y5I2 948 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 TGP01266 2768 aa8.19□□□□□ -1.1
EXOSC3-206ENST00000489414 VPS13CQ709C8 3753 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 BTBD18B2RXH4 712 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 ERLIN2O94905 339 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 LIPCP11150 499 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 CPB1P15086 417 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 NTSR1P30989 418 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 WASP42768 502 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 FAM160A1Q05DH4 1040 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 LTBQ06643 244 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 DUSP4Q13115 394 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 ORC1Q13415 861 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 UPP1Q16831 310 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 SKOR2Q2VWA4 1001 aaPredicted RBP8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 KIAA1324Q6UXG2 1013 aaKnown RBP8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 Q6ZNB5 142 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 PHTF2Q8N3S3 785 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 ARL14EPQ8N8R7 260 aaPredicted RBP8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 GLIS1Q8NBF1 620 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 PRR7Q8TB68 274 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 SNX19Q92543 992 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 ERLEC1Q96DZ1 483 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 ABHD17AQ96GS6 310 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 C5orf34Q96MH7 638 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 SLC12A9Q9BXP2 914 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 PCED1AQ9H1Q7 454 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 ARHGEF4Q9NR80 690 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 PCDHGA7Q9Y5G6 932 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 COL4A3BPQ9Y5P4 624 aa8.18□□□□□ -1.1
EXOSC3-206ENST00000489414 TLN2Q9Y4G6 2542 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 FAM221AA4D161 298 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 PCP11498 1178 aaKnown RBP8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 SLC5A2P31639 672 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 PTGER4P35408 488 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 RPL10AP62906 217 aaKnown RBP8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 MRPL49Q13405 166 aaKnown RBP8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 PCBP1Q15365 356 aaKnown RBP eCLIP8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 HSP90AB4PQ58FF6 505 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 CCDC178Q5BJE1 867 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 BMP2KLQ5H9B9 411 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 ZNF280DQ6N043 979 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 CEP85Q6P2H3 762 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 CDH24Q86UP0 819 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 KIF1BPQ96EK5 621 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 PGLYRP2Q96PD5 576 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 GABRG3Q99928 467 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 DCTPP1Q9H773 170 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 PRDM8Q9NQV8 689 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 ITM2CQ9NQX7 267 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 PCDHA6Q9UN73 950 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 SLC5A6Q9Y289 635 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 PCDHA8Q9Y5H6 950 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 ENTPD2Q9Y5L3 495 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 NBEAL2Q6ZNJ1 2754 aa8.17□□□□□ -1.1
EXOSC3-206ENST00000489414 SPDYE3A6NKU9 549 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 VILLO15195 856 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 IGLV3-19P01714 112 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 CYP17A1P05093 508 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 NMT1P30419 496 aaKnown RBP8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 OXTRP30559 389 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 NEDD4P46934 1319 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 QARSP47897 775 aaKnown RBP8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 TPMTP51580 245 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 KDSRQ06136 332 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 UGCGQ16739 394 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 UBE2SQ16763 222 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 MTERF2Q49AM1 385 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 VPS53Q5VIR6 699 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 TXNDC8Q6A555 127 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 CASC1Q6TDU7 716 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 ADAT2Q7Z6V5 191 aaKnown RBP8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 TP53INP2Q8IXH6 220 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 TEX19Q8NA77 164 aa8.16□□□□□ -1.1
EXOSC3-206ENST00000489414 ESR2Q92731 530 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms