RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 EXOC4Q96A65 974 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 CLDN23Q96B33 292 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 SMG9Q9H0W8 520 aaKnown RBP25.43■■□□□ 1.66
PTPN18-213ENST00000489215 GKN1Q9NS71 199 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 CISHQ9NSE2 258 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 IL37Q9NZH6 218 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 HMGXB4Q9UGU5 601 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 RWDD2AQ9UIY3 292 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 ARHGAP26Q9UNA1 814 aa25.43■■□□□ 1.66
PTPN18-213ENST00000489215 H0Y858 1186 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 CCDC130P13994 396 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 CD72P21854 359 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 ANGPT1Q15389 498 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 TMEM176AQ96HP8 235 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 HEXIM2Q96MH2 286 aaKnown RBP25.42■■□□□ 1.66
PTPN18-213ENST00000489215 CYP2S1Q96SQ9 504 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 FAM83CQ9BQN1 747 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 SRRTQ9BXP5 876 aaKnown RBP25.42■■□□□ 1.66
PTPN18-213ENST00000489215 CLSTN2Q9H4D0 955 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 FAM49BQ9NUQ9 324 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 TMEM30AQ9NV96 361 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 CCL26Q9Y258 94 aa25.42■■□□□ 1.66
PTPN18-213ENST00000489215 COL4A2P08572 1712 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 C2orf78A6NCI8 922 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 GOLGA6L22H0YM25 854 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 TNFRSF10BO14763 440 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 ABL1P00519 1130 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 TARSP26639 723 aaKnown RBP25.41■■□□□ 1.66
PTPN18-213ENST00000489215 SLC5A3P53794 718 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 STX17P56962 302 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 MAP3K7CLP57077 242 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 SLC8A3P57103 927 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 IFRD2Q12894 506 aaPredicted RBP25.41■■□□□ 1.66
PTPN18-213ENST00000489215 ORC1Q13415 861 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 SNX30Q5VWJ9 437 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 DDX42Q86XP3 938 aaKnown RBP eCLIP25.41■■□□□ 1.66
PTPN18-213ENST00000489215 C1orf210Q8IVY1 113 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 WHAMMQ8TF30 809 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 TATDN2Q93075 761 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 TWNKQ96RR1 684 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 SMOQ99835 787 aa25.41■■□□□ 1.66
PTPN18-213ENST00000489215 FAM92AA1XBS5 289 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 LRRN2O75325 713 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 ADORA2BP29275 332 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 SLC7A9P82251 487 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 CUL2Q13617 745 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 RUNX3Q13761 415 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 MTF1Q14872 753 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 ZFYVE19Q96K21 471 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 NUP62CLQ9H1M0 184 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 GTSE1Q9NYZ3 720 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 DACH1Q9UI36 760 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 KIAA1257Q9ULG3 409 aa25.4■■□□□ 1.66
PTPN18-213ENST00000489215 MTF2Q9Y483 593 aaPredicted RBP25.4■■□□□ 1.66
PTPN18-213ENST00000489215 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.4■■□□□ 1.66
PTPN18-213ENST00000489215 SPECC1L-ADORA2AF8WAN1 911 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 TUBP50607 506 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 LRRC32Q14392 662 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 ZNF77Q15935 545 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 ZNF394Q53GI3 561 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 TRIM59Q8IWR1 403 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 OSCP1Q8WVF1 389 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 NT5C1BQ96P26 610 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 SLC22A12Q96S37 553 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 DUSP16Q9BY84 665 aa25.39■■□□□ 1.66
PTPN18-213ENST00000489215 TLR8Q9NR97 1041 aaKnown RBP25.39■■□□□ 1.66
PTPN18-213ENST00000489215 NDRG2Q9UN36 371 aaKnown RBP25.39■■□□□ 1.66
PTPN18-213ENST00000489215 KIF26AQ9ULI4 1882 aaPredicted RBP25.38■■□□□ 1.65
PTPN18-213ENST00000489215 OLFM2O95897 454 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 OAS1P00973 400 aaKnown RBP25.38■■□□□ 1.65
PTPN18-213ENST00000489215 CTHP32929 405 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 KCNH2Q12809 1159 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 USP4Q13107 963 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 NR1H3Q13133 447 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 DGKKQ5KSL6 1271 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 HECTD3Q5T447 861 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 MAMSTRQ6ZN01 415 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 CLEC20AQ6ZU45 233 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 ZMIZ2Q8NF64 920 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 SCAMP5Q8TAC9 235 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 SH3RF2Q8TEC5 729 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 ATP2A3Q93084 1043 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 IPO9Q96P70 1041 aaKnown RBP25.38■■□□□ 1.65
PTPN18-213ENST00000489215 UBXN6Q9BZV1 441 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 SPATA6Q9NWH7 488 aaPredicted RBP25.38■■□□□ 1.65
PTPN18-213ENST00000489215 DUS2Q9NX74 493 aaKnown RBP25.38■■□□□ 1.65
PTPN18-213ENST00000489215 F5P12259 2224 aa25.38■■□□□ 1.65
PTPN18-213ENST00000489215 HELZP42694 1942 aaKnown RBP25.37■■□□□ 1.65
PTPN18-213ENST00000489215 SHISA7A6NL88 538 aa25.37■■□□□ 1.65
PTPN18-213ENST00000489215 SLC9A3R1O14745 358 aaPredicted RBP25.37■■□□□ 1.65
PTPN18-213ENST00000489215 LAMTOR5O43504 91 aa25.37■■□□□ 1.65
PTPN18-213ENST00000489215 BEST1O76090 585 aa25.37■■□□□ 1.65
PTPN18-213ENST00000489215 AFPP02771 609 aaKnown RBP25.37■■□□□ 1.65
PTPN18-213ENST00000489215 IFNAR2P48551 515 aa25.37■■□□□ 1.65
PTPN18-213ENST00000489215 RAD23BP54727 409 aa25.37■■□□□ 1.65
PTPN18-213ENST00000489215 PPP1R26Q5T8A7 1209 aaPredicted RBP25.37■■□□□ 1.65
PTPN18-213ENST00000489215 ARHGAP17Q68EM7 881 aa25.37■■□□□ 1.65
PTPN18-213ENST00000489215 CPA6Q8N4T0 437 aa25.37■■□□□ 1.65
PTPN18-213ENST00000489215 SLC4A11Q8NBS3 891 aa25.37■■□□□ 1.65
PTPN18-213ENST00000489215 CHORDC1Q9UHD1 332 aaPredicted RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms