RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ANXA9O76027 345 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 CALB2P22676 271 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 SERPINB1P30740 379 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 OTOAQ7RTW8 1153 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 USP13Q92995 863 aaPredicted RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 H2AFY2Q9P0M6 372 aaPredicted RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 CEP152O94986 1710 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 PRR23D1E9PI22 279 aaPredicted RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 MTSS1O43312 755 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 EFCAB14O75071 495 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 PRR23D2P0DMB1 279 aaPredicted RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 EARS2Q5JPH6 523 aaKnown RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 NOTUMQ6P988 496 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 NMD3Q96D46 503 aaKnown RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 PPP1R2P1Q96PQ5 205 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 CINPQ9BW66 212 aaPredicted RBP18.22■□□□□ 0.51
NPHP4-209ENST00000489180 YIPF2Q9BWQ6 316 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 GGA3Q9NZ52 723 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 NEXMIFQ5QGS0 1516 aa18.22■□□□□ 0.51
NPHP4-209ENST00000489180 PRRG1O14668 218 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 PSMC6P62333 389 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 CENPPQ6IPU0 288 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 STRA8Q7Z7C7 330 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 KIAA0895Q8NCT3 520 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 CPB2Q96IY4 423 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 GJD4Q96KN9 370 aaPredicted RBP18.21■□□□□ 0.51
NPHP4-209ENST00000489180 E9PCH4 1651 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 O00370 1275 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 ALDH1A1P00352 501 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 IMPDH2P12268 514 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 ACO1P21399 889 aaKnown RBP18.21■□□□□ 0.51
NPHP4-209ENST00000489180 SNX17Q15036 470 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 PKN1Q16512 942 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 FOXR1Q6PIV2 292 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 UNC45BQ8IWX7 931 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 PHF21AQ96BD5 680 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 GPRASP2Q96D09 838 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 EFCAB1Q9HAE3 211 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 SELENONQ9NZV5 590 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 PCDHB8Q9UN66 801 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 HEATR9A2RTY3 570 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 HNRNPRO43390 633 aaKnown RBP18.21■□□□□ 0.51
NPHP4-209ENST00000489180 APOA4P06727 396 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 PSMC3P17980 439 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 ST8SIA6P61647 398 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 PDPK2PQ6A1A2 396 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 RINLQ6ZS11 566 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 KCTD17Q8N5Z5 321 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 RIPK2O43353 540 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 ICAM1P05362 532 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 PCNX4Q63HM2 1172 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 TNIP2Q8NFZ5 429 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 KATNAL1Q9BW62 490 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 CRLS1Q9UJA2 301 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 TRMT6Q9UJA5 497 aaKnown RBP18.21■□□□□ 0.51
NPHP4-209ENST00000489180 USP18Q9UMW8 372 aa18.21■□□□□ 0.51
NPHP4-209ENST00000489180 SASH3O75995 380 aa18.21■□□□□ 0.5
NPHP4-209ENST00000489180 DLGAP3O95886 979 aa18.21■□□□□ 0.5
NPHP4-209ENST00000489180 RALBP11234 206 aa18.21■□□□□ 0.5
NPHP4-209ENST00000489180 DEFA1P59665 94 aa18.21■□□□□ 0.5
NPHP4-209ENST00000489180 DEFA3P59666 94 aa18.21■□□□□ 0.5
NPHP4-209ENST00000489180 DDX39BQ13838 428 aaKnown RBP18.21■□□□□ 0.5
NPHP4-209ENST00000489180 DCP1BQ8IZD4 617 aaKnown RBP18.21■□□□□ 0.5
NPHP4-209ENST00000489180 SLC7A5P2Q9GIP4 190 aa18.21■□□□□ 0.5
NPHP4-209ENST00000489180 PIF1Q9H611 641 aa18.21■□□□□ 0.5
NPHP4-209ENST00000489180 MEI4A8MW99 385 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 ATP9AO75110 1047 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 PROSCO94903 275 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 CLCN3P51790 818 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 SLC30A10Q6XR72 485 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 MRGBPQ9NV56 204 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 SPASTQ9UBP0 616 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 SEPT3Q9UH03 358 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 RNF103O00237 685 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 NR5A2O00482 541 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 OASLQ15646 514 aaKnown RBP18.2■□□□□ 0.5
NPHP4-209ENST00000489180 SEL1L3Q68CR1 1132 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 ZNF720Q7Z2F6 126 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 TMEM237Q96Q45 408 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 MYOZ2Q9NPC6 264 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 OGTO15294 1046 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 AP1G2O75843 785 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 SEC23AQ15436 765 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 NTRK3Q16288 839 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 KBTBD12Q3ZCT8 623 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 TDRD5Q8NAT2 981 aaKnown RBP18.2■□□□□ 0.5
NPHP4-209ENST00000489180 KLHL4Q9C0H6 718 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 RXFP1Q9HBX9 757 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 A0A0A6YYK5 440 aaPredicted RBP18.2■□□□□ 0.5
NPHP4-209ENST00000489180 LINC00854A0A1B0GVQ3 168 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 VWA5AO00534 786 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 HARS2P49590 506 aaKnown RBP18.2■□□□□ 0.5
NPHP4-209ENST00000489180 GEMP55040 296 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 EFL1Q7Z2Z2 1120 aaKnown RBP18.2■□□□□ 0.5
NPHP4-209ENST00000489180 SAMD7Q7Z3H4 446 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 SLC5A5Q92911 643 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 TATDN2Q93075 761 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 DCLRE1BQ9H816 532 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 UBP1Q9NZI7 540 aa18.2■□□□□ 0.5
NPHP4-209ENST00000489180 PIK3CDO00329 1044 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms